Basic Information:

  VIRBase ID:  

VHID00567524

  Virus:  

Macacine alphaherpesvirus 1 (CeHV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2455

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hbv-miR-B21RC-5p:  MIMAT0031770          TPD52L1:  NM_001292026     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hbv-miR-B21RC-5p	TPD52L1
miRBase Accession/Entrez ID	MIMAT0031770	7164
Organism	Macacine alphaherpesvirus 1 (CeHV-1)	Homo sapiens
Category	miRNA	mRNA
Alias	-	D53//TPD53

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	TPD52L1	chr6:125504366(+) A-I      intronic chr6:125504386(+) A-I      intronic chr6:125504368(+) A-I      intronic chr6:125489744(+) A-I      intronic chr6:125489728(+) A-I      intronic chr6:125489727(+) A-I      intronic chr6:125489725(+) A-I      intronic chr6:125490381(+) A-I      intronic chr6:125504362(+) A-I      intronic chr6:125504570(+) A-I      intronic chr6:125504595(+) A-I      intronic chr6:125484808(+) A-I      intronic chr6:125504360(+) A-I      intronic chr6:125484816(+) A-I      intronic chr6:125489776(+) A-I      intronic chr6:125507101(+) A-I      intronic chr6:125581873(+) A-I      intronic chr6:125488147(+) A-I      intronic chr6:125493535(+) A-I      intronic

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	TPD52L1	chr6:125474896-125474897(+) m6A 5'UTR//intron       25456834//24981863 chr6:125541234-125541235(+) m6A 5'UTR//CDS//exon       24981863 chr6:125541239-125541240(+) m6A 5'UTR//CDS//exon       24981863 chr6:125541252-125541253(+) m6A 5'UTR//CDS//exon       24981863 chr6:125550331-125550332(+) m6A CDS//exon       24981863 chr6:125550337-125550338(+) m6A CDS//exon       24981863 chr6:125550348-125550349(+) m6A CDS//exon       24981863 chr6:125550367-125550368(+) m6A CDS//exon       24981863 chr6:125550372-125550373(+) m6A CDS//exon       24981863 chr6:125550401-125550402(+) m6A CDS//exon       24981863 chr6:125569437-125569438(+) m6A CDS//exon       24981863 chr6:125569446-125569447(+) m6A CDS//exon       24981863 chr6:125569522-125569523(+) m6A CDS//exon       24981863 chr6:125583998-125583999(+) m6A 3'UTR//CDS//exon       22575960 chr6:125584081-125584082(+) m6A 3'UTR//CDS//exon       22575960 chr6:125584137-125584138(+) m6A 3'UTR//exon       22575960 chr6:125584186-125584187(+) m6A 3'UTR//exon       - chr6:125584481-125584482(+) m6A 3'UTR//exon       27773535

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	TPD52L1	Chromatin K562 cells     - Exosome Blood     - Nucleoplasm K562 cells     - Nucleus K562 cells     - Ribosome Colon cancer cells     24393600

Interaction Network (The top 100 interactions):

Interactor1: hbv-miR-B21RC-5p
Interactor2: TPD52L1

Evidence Support:

Prediction-Evidence	miRanda//PITA//RNAHybrid//Targetscan
Support Database	VmiReg