Detail Information

Basic Information:


  VIRBase ID:  

VHID00567478

  Virus:  

Macacine alphaherpesvirus 1 (CeHV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2455

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hbv-miR-B21RC-5p:           SOD3:      

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Interactor Information:


Interactor1 Interactor2
Symbol hbv-miR-B21RC-5p SOD3
miRBase
Accession/Entrez ID
MIMAT0031770 6649
Organism Macacine alphaherpesvirus 1 (CeHV-1) Homo sapiens
Category miRNA mRNA
Alias - EC-SOD

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase SOD3
chr4:24801462-24801463(+) m6A CDS       25456834
chr4:24801501-24801502(+) m6A CDS       25456834
chr4:24801895-24801896(+) m6A 3'UTR       25456834
chr4:24801943-24801944(+) m6A 3'UTR       25456834//24981863
chr4:24802027-24802028(+) m6A 3'UTR       25456834//24981863
chr4:24802051-24802052(+) m6A 3'UTR       25456834//24981863
chr4:24802111-24802112(+) m6A 3'UTR       25456834//24981863
chr4:24802166-24802167(+) m6A 3'UTR       25456834//24981863
chr4:24802196-24802197(+) m6A 3'UTR       25456834

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate SOD3
Endoplasmic reticulum Human myelogenous leukemia cell line (K-562)     21613539
Exosome Blood     -

Interaction Network (The top 100 interactions):


Interactor1: hbv-miR-B21RC-5p
Interactor2: SOD3

Evidence Support:


Prediction-Evidence miRanda//PITA//RNAHybrid//Targetscan
Support Database VmiReg

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