Basic Information:

  VIRBase ID:  

VHID00567379

  Virus:  

Macacine alphaherpesvirus 1 (CeHV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hbv-miR-B21RC-5p:  MIMAT0031770          PLK1:  NM_005030     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hbv-miR-B21RC-5p	PLK1
miRBase Accession/Entrez ID	MIMAT0031770	5347
Organism	Macacine alphaherpesvirus 1 (CeHV-1)	Homo sapiens
Category	miRNA	mRNA
Alias	-	PLK//STPK13

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	PLK1	chr16:23696877(+) A-I      intronic chr16:23696108(+) A-I      intronic chr16:23696118(+) A-I      intronic chr16:23696852(+) A-I      intronic chr16:23696935(+) A-I      intronic chr16:23697888(+) A-I      intronic chr16:23697876(+) A-I      intronic chr16:23696842(+) A-I      intronic chr16:23694512(+) A-I      intronic chr16:23697973(+) A-I      intronic chr16:23697953(+) A-I      intronic chr16:23697992(+) A-I      intronic chr16:23697913(+) A-I      intronic chr16:23696161(+) A-I      intronic chr16:23696909(+) A-I      intronic chr16:23696739(+) A-I      intronic chr16:23697526(+) A-I      intronic chr16:23696950(+) A-I      intronic chr16:23697875(+) A-I      intronic chr16:23697893(+) A-I      intronic chr16:23697947(+) A-I      intronic

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	PLK1	chr16:23689755-23689756(+) m6A exon       25456834 chr16:23690389-23690390(+) m6A CDS//exon       22575960 chr16:23690473-23690474(+) m6A CDS//exon       22575960 chr16:23690617-23690618(+) m6A CDS//exon       22575960 chr16:23690687-23690688(+) m6A CDS//exon//intron       - chr16:23690716-23690717(+) m6A CDS//exon//intron       - chr16:23691107-23691108(+) m6A 5'UTR//exon//intron       - chr16:23691139-23691140(+) m6A 5'UTR//exon//intron       - chr16:23691194-23691195(+) m6A exon//intron       - chr16:23691504-23691505(+) m6A 3'UTR//5'UTR//CDS//exon       22575960 chr16:23691522-23691523(+) m6A 3'UTR//5'UTR//CDS//exon       22575960 chr16:23692244-23692245(+) m6A 3'UTR//5'UTR//CDS//exon//intron       22575960 chr16:23692284-23692285(+) m6A 3'UTR//5'UTR//CDS//exon//intron       22575960 chr16:23692296-23692297(+) m6A 3'UTR//5'UTR//CDS//exon//intron       22575960 chr16:23693405-23693406(+) m6A CDS//exon       27773535//22575960 chr16:23693418-23693419(+) m6A CDS//exon       27773535//22575960 chr16:23693436-23693437(+) m6A CDS//exon       24981863//27773535//22575960 chr16:23695235-23695236(+) m6A CDS//exon       24981863 chr16:23695371-23695372(+) m6A CDS//exon       24284625//24981863 chr16:23698832-23698833(+) m6A CDS//exon       - chr16:23698848-23698849(+) m6A CDS//exon       - chr16:23700042-23700043(+) m6A CDS//exon       22575960 chr16:23700051-23700052(+) m6A CDS//exon       22575960 chr16:23700925-23700926(+) m6A CDS//exon       22575960 chr16:23701244-23701245(+) m6A CDS//exon       24284625//22575960 chr16:23701334-23701335(+) m6A CDS//exon       24284625//22575960 chr16:23701403-23701404(+) m6A 3'UTR//exon       24284625//24981863//22575960

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	PLK1	Chromatin K562 cells     - Cytosol Human myelogenous leukemia cell line (K-562)     21613539 Cytosol HCC cell line (HepG2)     - Exosome Blood     - Insoluble cytoplasm HCC cell line (HepG2)     - Nucleolus K562 cells     - Nucleoplasm K562 cells     - Nucleus HCC cell line (HepG2)|HeLa-S3 cells|K562 cells     - Ribosome Colon cancer cells     24393600

Interaction Network (The top 100 interactions):

Interactor1: hbv-miR-B21RC-5p
Interactor2: PLK1

Evidence Support:

Prediction-Evidence	miRanda//RNAHybrid
Support Database	VmiReg