Basic Information:

  VIRBase ID:  

VHID00567214

  Virus:  

Macacine alphaherpesvirus 1 (CeHV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2455

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hbv-miR-B21RC-5p:  MIMAT0031770          HOXD9:  NM_014213     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hbv-miR-B21RC-5p	HOXD9
miRBase Accession/Entrez ID	MIMAT0031770	3235
Organism	Macacine alphaherpesvirus 1 (CeHV-1)	Homo sapiens
Category	miRNA	mRNA
Alias	-	Hox-4.3//Hox-5.2//HOX4//HOX4C

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	HOXD9	chr2:176987488-176987489(+) m6A 5'UTR       24284625//24209618//24981863//22608085 chr2:176987563-176987564(+) m6A CDS       24209618//24981863//22608085 chr2:176987985-176987986(+) m6A CDS       24209618//24981863 chr2:176988066-176988067(+) m6A CDS       24209618//24981863 chr2:176988165-176988166(+) m6A CDS       24284625 chr2:176988676-176988677(+) m6A CDS       24284625//24209618 chr2:176988781-176988782(+) m6A CDS       24284625//24209618//24981863//22608085 chr2:176988824-176988825(+) m6A CDS       24284625//24209618//24981863//22608085 chr2:176988847-176988848(+) m6A CDS       24284625//24209618//24981863//22575960//22608085 chr2:176988898-176988899(+) m6A CDS       24284625//24209618//24981863//22575960//22608085 chr2:176988995-176988996(+) m6A 3'UTR       24284625//24209618//24981863//22608085 chr2:176989012-176989013(+) m6A 3'UTR       24284625//24209618//24981863//22608085 chr2:176989083-176989084(+) m6A 3'UTR       24284625//24209618//24981863//22608085 chr2:176989115-176989116(+) m6A 3'UTR       24284625//24209618//24981863 chr2:176989351-176989352(+) m6A 3'UTR       24284625

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	HOXD9	Endoplasmic reticulum Human myelogenous leukemia cell line (K-562)     21613539 Exosome Blood     -

Interaction Network (The top 100 interactions):

Interactor1: hbv-miR-B21RC-5p
Interactor2: HOXD9

Evidence Support:

Prediction-Evidence	miRanda//PITA//RNAHybrid//Targetscan
Support Database	VmiReg