Basic Information:

  VIRBase ID:  

VHID00567020

  Virus:  

Macacine alphaherpesvirus 1 (CeHV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hbv-miR-B21RC-5p:  MIMAT0031770          AP2M1:  NM_001311198     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hbv-miR-B21RC-5p	AP2M1
miRBase Accession/Entrez ID	MIMAT0031770	1173
Organism	Macacine alphaherpesvirus 1 (CeHV-1)	Homo sapiens
Category	miRNA	mRNA
Alias	-	AP50//CLAPM1//MRD60//mu2

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	AP2M1	chr3:183897499(+) A-I      intronic chr3:183897518(+) A-I      intronic chr3:183897670(+) A-I      intronic chr3:183897671(+) A-I      intronic

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	AP2M1	chr3:183892690-183892691(+) m6A 5'UTR//exon       24284625//24209618//25456834//24981863//27371828//22575960//22608085 chr3:183892740-183892741(+) m6A 5'UTR//exon       24284625//24209618//25456834//24981863//27371828//22575960//22608085 chr3:183894767-183894768(+) m6A 5'UTR//exon       24284625//24209618//24981863//22575960 chr3:183896852-183896853(+) Am CDS//exon       - chr3:183896868-183896869(+) m6A CDS//exon       27773535 chr3:183896877-183896878(+) m6A CDS//exon       27773535 chr3:183896956-183896957(+) m6A exon//intron       27773535 chr3:183897991-183897992(+) m6A CDS//exon       27371828 chr3:183898006-183898007(+) m6A CDS//exon       27371828 chr3:183898056-183898057(+) m6A exon//intron       27371828 chr3:183898751-183898752(+) m6A CDS//exon//intron       22575960 chr3:183899003-183899004(+) m6A CDS//exon       22575960 chr3:183899009-183899010(+) Am CDS//exon       - chr3:183899716-183899717(+) m6A CDS//exon       22575960 chr3:183899771-183899772(+) m6A CDS//exon       22575960 chr3:183899807-183899808(+) m6A CDS//exon       22575960 chr3:183899841-183899842(+) m6A CDS//exon//intron       26404942//22575960 chr3:183899960-183899961(+) m6A CDS//exon       26404942//22575960 chr3:183900648-183900649(+) m6A CDS//exon       22575960 chr3:183901319-183901320(+) m6A CDS//exon       24284625 chr3:183901330-183901331(+) m6A CDS//exon       24284625 chr3:183901392-183901393(+) m6A CDS//exon       24284625//26404942//22575960 chr3:183901565-183901566(+) m6A 3'UTR//exon       24284625//22575960

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	AP2M1	Chromatin K562 cells     - Cytosol HeLa-S3 cells     - Exosome Blood     - Nucleolus K562 cells     - Nucleoplasm K562 cells     - Nucleus HeLa-S3 cells|K562 cells     - Ribosome Colon cancer cells     24393600

Interaction Network (The top 100 interactions):

Interactor1: hbv-miR-B21RC-5p
Interactor2: AP2M1

Evidence Support:

Prediction-Evidence	miRanda//RNAHybrid
Support Database	VmiReg