Basic Information:

  VIRBase ID:  

VHID00566619

  Virus:  

Macacine alphaherpesvirus 1 (CeHV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2455

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hbv-miR-B19-5p:  MIMAT0031769          TTLL11:  NR_171570     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	hbv-miR-B19-5p	TTLL11
miRBase Accession/Entrez ID	MIMAT0031769	158135
Organism	Macacine alphaherpesvirus 1 (CeHV-1)	Homo sapiens
Category	miRNA	mRNA
Alias	-	bA244O19.1//C9orf148//C9orf20//TTLL11-IT1

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	TTLL11	chr9:124792966(-) A-I      intronic chr9:124768568(-) A-I      intronic chr9:124766766(-) A-I      intronic chr9:124766362(-) A-I      intronic chr9:124765901(-) A-I      intronic chr9:124737828(-) A-I      intronic chr9:124737787(-) A-I      intronic chr9:124846043(-) A-I      intronic chr9:124846067(-) A-I      intronic chr9:124852205(-) A-I      intronic chr9:124824009(-) A-I      intronic chr9:124711147(-) A-I      intronic chr9:124711149(-) A-I      intronic chr9:124711200(-) A-I      intronic chr9:124766656(-) A-I      intronic chr9:124766701(-) A-I      intronic chr9:124766725(-) A-I      intronic chr9:124729572(-) A-I      intronic chr9:124724211(-) A-I      intronic chr9:124697439(-) A-I      intronic chr9:124666532(-) A-I      intronic chr9:124666528(-) A-I      intronic chr9:124794889(-) A-I      intronic chr9:124795136(-) A-I      intronic chr9:124824002(-) A-I      intronic chr9:124824835(-) A-I      intronic chr9:124824836(-) A-I      intronic chr9:124666524(-) A-I      intronic chr9:124666523(-) A-I      intronic chr9:124618471(-) A-I      intronic chr9:124606225(-) A-I      intronic chr9:124712395(-) A-I      intronic chr9:124711168(-) A-I      intronic chr9:124824885(-) A-I      intronic chr9:124846002(-) A-I      intronic chr9:124846003(-) A-I      intronic chr9:124846006(-) A-I      intronic chr9:124846042(-) A-I      intronic chr9:124602729(-) A-I      intronic chr9:124740147(-) A-I      intronic chr9:124586672(-) A-I      intronic chr9:124852206(-) A-I      intronic chr9:124667727(-) A-I      intronic chr9:124845923(-) A-I      intronic chr9:124604800(-) A-I      intronic chr9:124763512(-) A-I      intronic chr9:124724252(-) A-I      intronic chr9:124779870(-) A-I      intronic chr9:124744813(-) A-I      intronic chr9:124648136(-) A-I      intronic chr9:124667795(-) A-I      intronic chr9:124618579(-) A-I      intronic chr9:124618589(-) A-I      intronic chr9:124679718(-) A-I      intronic chr9:124667791(-) A-I      intronic chr9:124696412(-) A-I      intronic chr9:124590681(-) A-I      intronic chr9:124682424(-) A-I      intronic chr9:124795146(-) A-I      intronic chr9:124765849(-) A-I      intronic chr9:124794864(-) A-I      intronic chr9:124667798(-) A-I      intronic chr9:124591192(-) A-I      intronic chr9:124795529(-) A-I      intronic chr9:124724259(-) A-I      intronic chr9:124795434(-) A-I      intronic chr9:124825137(-) A-I      intronic chr9:124586638(-) A-I      intronic chr9:124586693(-) A-I      intronic chr9:124744752(-) A-I      intronic chr9:124737746(-) A-I      intronic chr9:124591369(-) A-I      intronic chr9:124596940(-) A-I      intronic chr9:124793175(-) A-I      intronic chr9:124740155(-) A-I      intronic chr9:124740204(-) A-I      intronic chr9:124696400(-) A-I      intronic chr9:124795397(-) A-I      intronic chr9:124690898(-) A-I      intronic chr9:124586692(-) A-I      intronic chr9:124682470(-) A-I      intronic chr9:124836395(-) A-I      intronic chr9:124591401(-) A-I      intronic chr9:124763513(-) A-I      intronic

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	TTLL11	chr9:124584438-124584439(-) m6A 3'UTR//exon       24284625//24981863//22608085 chr9:124584534-124584535(-) m6A 3'UTR//exon       24284625//24981863//27773535//22608085 chr9:124584628-124584629(-) m6A 3'UTR//intron       24284625//24981863//27773535//27371828//22608085 chr9:124584739-124584740(-) m6A 3'UTR//intron       24981863//27371828 chr9:124584880-124584881(-) m6A 3'UTR//CDS//intron       24981863 chr9:124584929-124584930(-) m6A 3'UTR//CDS//intron       24981863 chr9:124647268-124647269(-) m6A intron       27773535 chr9:124647275-124647276(-) m6A intron       27773535 chr9:124647283-124647284(-) m6A intron       27773535 chr9:124647304-124647305(-) m6A intron       27773535 chr9:124647366-124647367(-) m6A intron       27773535 chr9:124647401-124647402(-) m6A intron       27773535 chr9:124647596-124647597(-) m6A intron       - chr9:124647618-124647619(-) m6A intron       - chr9:124647628-124647629(-) m6A intron       - chr9:124751510-124751511(-) m6A 3'UTR//CDS       24284625//27773535//22608085 chr9:124751620-124751621(-) m6A 3'UTR//CDS       24284625//25456834//24981863//27773535//22575960//22608085 chr9:124751643-124751644(-) m6A 3'UTR//CDS       24284625//25456834//24981863//27773535//22575960//22608085 chr9:124751669-124751670(-) m6A 3'UTR//CDS       24284625//25456834//24981863//27773535//22575960//22608085 chr9:124751699-124751700(-) m6A 3'UTR//CDS       24284625//24209618//25456834//24981863//27773535//22608085 chr9:124751741-124751742(-) m6A 3'UTR//CDS       24284625//24981863//27773535//22608085 chr9:124751788-124751789(-) m6A 3'UTR//CDS       24284625//24981863//27773535//22608085 chr9:124751819-124751820(-) m6A 3'UTR//CDS       24284625//24981863//27773535//22608085 chr9:124751881-124751882(-) m6A 3'UTR//CDS       24284625//24981863//27773535//22608085 chr9:124751925-124751926(-) m6A 3'UTR//CDS//intron       24284625//24981863//27773535//22608085 chr9:124751951-124751952(-) m6A 3'UTR//CDS//intron       24981863//27773535//22608085 chr9:124751995-124751996(-) m6A 3'UTR//CDS//intron       24981863//27773535//22608085 chr9:124855015-124855016(-) m6A CDS       27773536 chr9:124855032-124855033(-) m6A CDS       27371828//27773536 chr9:124855107-124855108(-) m6A CDS       27371828//27773536 chr9:124855197-124855198(-) m6A CDS       27371828//27773536 chr9:124855277-124855278(-) m6A CDS       27371828//27773536 chr9:124855310-124855311(-) m6A CDS       24981863//27371828//27773536 chr9:124855491-124855492(-) m6A CDS       27371828//27773536 chr9:124855604-124855605(-) m6A CDS       27773536

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	TTLL11	Chromatin K562 cells     - Cytosol Human myelogenous leukemia cell line (K-562)     21613539 Exosome Blood     - Membrane HCC cell line (HepG2)     - Nucleoplasm K562 cells     - Nucleus HeLa-S3 cells     -

Interaction Network (The top 100 interactions):

Interactor1: hbv-miR-B19-5p
Interactor2: TTLL11

Evidence Support:

Prediction-Evidence	miRanda//PITA//RNAHybrid//Targetscan
Support Database	VmiReg