Basic Information:

  VIRBase ID:  

VHID00566515

  Virus:  

Macacine alphaherpesvirus 1 (CeHV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hbv-miR-B19-5p:  MIMAT0031769          ZNF543:  NM_213598     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hbv-miR-B19-5p	ZNF543
miRBase Accession/Entrez ID	MIMAT0031769	125919
Organism	Macacine alphaherpesvirus 1 (CeHV-1)	Homo sapiens
Category	miRNA	mRNA
Alias	-	-

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	ZNF543	chr19:57835599(+) A-I      intronic chr19:57837120(+) A-I      intronic chr19:57837020(+) A-I      intronic chr19:57837019(+) A-I      intronic chr19:57837013(+) A-I      intronic chr19:57841006(+) A-I      3'UTR chr19:57841087(+) A-I      3'UTR chr19:57840961(+) A-I      3'UTR chr19:57841142(+) A-I      3'UTR chr19:57841007(+) A-I      3'UTR chr19:57841010(+) A-I      3'UTR chr19:57835553(+) A-I      intronic chr19:57833774(+) A-I      intronic chr19:57841154(+) A-I      3'UTR chr19:57835541(+) A-I      intronic chr19:57835559(+) A-I      intronic

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	ZNF543	chr19:57831879-57831880(+) m6A 5'UTR       24981863 chr19:57831895-57831896(+) m6A 5'UTR       24981863 chr19:57839084-57839085(+) m6A CDS       24284625//22608085 chr19:57839091-57839092(+) m6A CDS       24284625//25456834//22608085 chr19:57839147-57839148(+) m6A CDS       24284625//25456834//24981863//22608085 chr19:57839173-57839174(+) m6A CDS       24284625//25456834//24981863//22608085 chr19:57839339-57839340(+) m6A CDS       24284625//24981863//22608085 chr19:57839384-57839385(+) m6A CDS       24284625//24981863//22608085 chr19:57839532-57839533(+) m6A CDS       24284625//24981863//22608085 chr19:57839924-57839925(+) m6A CDS       22608085 chr19:57839971-57839972(+) m6A CDS       22608085 chr19:57840159-57840160(+) m6A CDS       24981863//22608085 chr19:57840176-57840177(+) m6A CDS       24981863//22608085 chr19:57840223-57840224(+) m6A CDS       24981863//22608085 chr19:57840260-57840261(+) m6A CDS       24981863//22608085 chr19:57840344-57840345(+) m6A CDS       24981863//22608085 chr19:57840391-57840392(+) m6A CDS       24284625//24981863//22608085 chr19:57840511-57840512(+) m6A CDS       24284625//24981863//22575960//22608085 chr19:57840539-57840540(+) m6A CDS       24284625//24981863//22575960//22608085 chr19:57840558-57840559(+) m6A CDS       24284625//25456834//24981863//22575960//22608085 chr19:57840578-57840579(+) m6A CDS       24284625//25456834//24981863//22575960//22608085 chr19:57840639-57840640(+) m6A 3'UTR       24284625//25456834//24981863//27773535//22608085 chr19:57840674-57840675(+) m6A 3'UTR       24284625//24981863//27773535//22608085 chr19:57840732-57840733(+) m6A 3'UTR       24284625//24981863//22608085 chr19:57840752-57840753(+) m6A 3'UTR       24284625//24981863//22608085 chr19:57840800-57840801(+) m6A 3'UTR       24284625//24981863//22608085 chr19:57840828-57840829(+) m6A 3'UTR       24981863//22608085 chr19:57841247-57841248(+) m6A 3'UTR       24981863 chr19:57841380-57841381(+) m6A 3'UTR       24981863//22608085 chr19:57841406-57841407(+) m6A 3'UTR       24981863 chr19:57841419-57841420(+) m6A 3'UTR       24981863 chr19:57841990-57841991(+) m6A 3'UTR       24981863

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	ZNF543	Chromatin K562 cells     - Cytoplasm Nasopharyngeal carcinoma cells     20498841 Exosome Blood     - Membrane HCC cell line (HepG2)     - Nucleolus K562 cells     - Nucleus Nasopharyngeal carcinoma cells     20498841 Nucleus HCC cell line (HepG2)     -

Interaction Network (The top 100 interactions):

Interactor1: hbv-miR-B19-5p
Interactor2: ZNF543

Evidence Support:

Prediction-Evidence	miRanda//RNAHybrid
Support Database	VmiReg