Basic Information:

  VIRBase ID:  

VHID00566440

  Virus:  

Macacine alphaherpesvirus 1 (CeHV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2455

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hbv-miR-B19-5p:  MIMAT0031769          ARRDC1:  NM_001317968     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hbv-miR-B19-5p	ARRDC1
miRBase Accession/Entrez ID	MIMAT0031769	92714
Organism	Macacine alphaherpesvirus 1 (CeHV-1)	Homo sapiens
Category	miRNA	mRNA
Alias	-	-

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	ARRDC1	chr9:140505900(+) A-I      intronic chr9:140505952(+) A-I      ncRNA chr9:140505945(+) A-I      ncRNA chr9:140504480(+) A-I      intronic chr9:140504473(+) A-I      intronic chr9:140504402(+) A-I      intronic chr9:140505868(+) A-I      intronic chr9:140505823(+) A-I      intronic chr9:140505822(+) A-I      intronic chr9:140505786(+) A-I      intronic chr9:140505772(+) A-I      intronic chr9:140505752(+) A-I      intronic chr9:140505746(+) A-I      intronic chr9:140505745(+) A-I      intronic chr9:140503767(+) A-I      intronic chr9:140505727(+) A-I      intronic chr9:140504989(+) A-I      intronic chr9:140504987(+) A-I      intronic chr9:140504977(+) A-I      intronic chr9:140505845(+) A-I      intronic chr9:140504239(+) A-I      intronic chr9:140505824(+) A-I      intronic chr9:140505805(+) A-I      intronic chr9:140504974(+) A-I      intronic chr9:140504965(+) A-I      intronic chr9:140504948(+) A-I      intronic chr9:140504896(+) A-I      intronic chr9:140505825(+) A-I      intronic chr9:140504927(+) A-I      intronic chr9:140504873(+) A-I      intronic chr9:140504872(+) A-I      intronic chr9:140503816(+) A-I      intronic chr9:140504465(+) A-I      intronic chr9:140504252(+) A-I      intronic chr9:140504175(+) A-I      intronic chr9:140504094(+) A-I      intronic chr9:140504383(+) A-I      intronic chr9:140504928(+) A-I      intronic chr9:140504405(+) A-I      intronic chr9:140504217(+) A-I      intronic chr9:140504116(+) A-I      intronic chr9:140504540(+) A-I      intronic chr9:140504213(+) A-I      intronic chr9:140504407(+) A-I      intronic chr9:140504240(+) A-I      intronic chr9:140504212(+) A-I      intronic chr9:140504441(+) A-I      intronic chr9:140502454(+) A-I      intronic chr9:140504867(+) A-I      intronic chr9:140504917(+) A-I      intronic chr9:140505880(+) A-I      intronic chr9:140506052(+) A-I      ncRNA

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	ARRDC1	chr9:140504240(+) A-I intron -    15258596 chr9:140504395(+) A-I intron -    15258596 chr9:140504441(+) A-I intron -    15258596 chr9:140504465(+) A-I intron -    15258596 chr9:140504917(+) A-I intron -    15258596 chr9:140505880(+) A-I intron -    22327324 chr9:140505890(+) A-I intron -    22327324 chr9:140505944(+) A-I intron -    22327324 chr9:140504867(+) A-G intron -    21725310

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	ARRDC1	chr9:140506044-140506045(+) m6A exon//intron       25456834 chr9:140506055-140506056(+) m6A exon//intron       24284625//25456834 chr9:140506099-140506100(+) m6A exon//intron       24284625//25456834 chr9:140506169-140506170(+) m6A exon//intron       24284625 chr9:140506315-140506316(+) m6A exon//intron       24284625//27371828 chr9:140506439-140506440(+) m6A exon//intron       25456834//27371828 chr9:140506607-140506608(+) m6A exon//intron       24284625//24209618//25456834//24981863//27371828//22608085 chr9:140506651-140506652(+) m6A exon//intron       24284625//24209618//25456834//24981863//27371828//22608085 chr9:140506666-140506667(+) m6A exon//intron       24284625//24209618//25456834//24981863//27371828//22608085 chr9:140506695-140506696(+) m6A exon//intron       24284625//24209618//25456834//24981863//22608085 chr9:140506758-140506759(+) m6A exon//intron       24284625//25456834//24981863//27371828//22608085 chr9:140506849-140506850(+) m6A exon//intron       24284625//25456834//27371828//22608085 chr9:140507176-140507177(+) m6A exon//intron       24284625//27371828//27773536 chr9:140507238-140507239(+) m6A exon//intron       24284625//27371828//27773536 chr9:140507452-140507453(+) m6A CDS//exon       25456834//27371828 chr9:140507710-140507711(+) m6A 3'UTR//intron       24284625//27773535 chr9:140507795-140507796(+) m6A 3'UTR//exon//intron       24284625//25456834//27371828//22608085 chr9:140507803-140507804(+) m6A 3'UTR//exon//intron       24284625//25456834//27371828//22608085 chr9:140507880-140507881(+) m6A 3'UTR//exon//intron       24284625//25456834//27371828//27773536//22608085 chr9:140508195-140508196(+) m6A CDS//exon       24284625//27371828//27773536 chr9:140508201-140508202(+) m6A CDS//exon       24284625//27371828//27773536 chr9:140508213-140508214(+) m6A CDS//exon       24284625//27773536 chr9:140508619-140508620(+) m6A CDS//exon       27371828//27773536 chr9:140508634-140508635(+) m6A CDS//exon       27371828//27773536 chr9:140508792-140508793(+) m6A CDS//exon       27371828//27773536 chr9:140509074-140509075(+) m6A CDS//exon       27371828 chr9:140509203-140509204(+) m6A CDS//exon       24284625//27371828//27773536 chr9:140509211-140509212(+) Y CDS//exon       26075521 chr9:140509505-140509506(+) m6A exon//intron       24284625//27371828 chr9:140509565-140509566(+) m6A CDS//exon       24284625//27371828//27773536 chr9:140509633-140509634(+) m6A 3'UTR//exon       24284625//25456834//27371828//27773536 chr9:140509689-140509690(+) m6A 3'UTR//exon       24284625//25456834//24981863//27371828//27773536 chr9:140509768-140509769(+) m6A 3'UTR//exon       24981863//27773536 chr9:140509778-140509779(+) m6A 3'UTR//exon       24981863//27773536 chr9:140509796-140509797(+) m6A 3'UTR//exon       24981863

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	ARRDC1	Exosome Blood     - Nucleolus K562 cells     - Nucleoplasm K562 cells     - Nucleus HeLa-S3 cells|K562 cells     - Ribosome Colon cancer cells     24393600

Interaction Network (The top 100 interactions):

Interactor1: hbv-miR-B19-5p
Interactor2: ARRDC1

Evidence Support:

Prediction-Evidence	miRanda//PITA//RNAHybrid//Targetscan
Support Database	VmiReg