Basic Information:

  VIRBase ID:  

VHID00566413

  Virus:  

Macacine alphaherpesvirus 1 (CeHV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hbv-miR-B19-5p:  MIMAT0031769          CTU1:  NM_145232     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	hbv-miR-B19-5p	CTU1
miRBase Accession/Entrez ID	MIMAT0031769	90353
Organism	Macacine alphaherpesvirus 1 (CeHV-1)	Homo sapiens
Category	miRNA	mRNA
Alias	-	ATPBD3//NCS6

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	CTU1	chr19:51603604(-) A-I      intronic chr19:51603623(-) A-I      intronic chr19:51603637(-) A-I      intronic chr19:51603664(-) A-I      intronic chr19:51603705(-) A-I      intronic chr19:51604236(-) A-I      intronic chr19:51605455(-) A-I      intronic chr19:51604372(-) A-I      intronic chr19:51604420(-) A-I      intronic chr19:51604334(-) A-I      intronic chr19:51605425(-) A-I      intronic chr19:51604299(-) A-I      intronic chr19:51604235(-) A-I      intronic chr19:51604300(-) A-I      intronic chr19:51609874(-) A-I      intronic chr19:51603610(-) A-I      intronic chr19:51603848(-) A-I      intronic chr19:51604459(-) A-I      intronic chr19:51603622(-) A-I      intronic chr19:51609852(-) A-I      intronic chr19:51603780(-) A-I      intronic chr19:51604370(-) A-I      intronic

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	CTU1	chr19:51601045-51601046(-) m6A 3'UTR       24284625//24981863//27773535//22608085 chr19:51601052-51601053(-) m6A 3'UTR       24284625//24981863//27773535//22608085 chr19:51601201-51601202(-) m6A 3'UTR       24284625 chr19:51601331-51601332(-) m6A 3'UTR       24284625//24209618//24981863//27773535 chr19:51601455-51601456(-) m6A 3'UTR       24284625//25456834//24981863//27773535//27371828 chr19:51601494-51601495(-) m6A 3'UTR       25456834//24981863//27371828//22608085 chr19:51601524-51601525(-) m6A 3'UTR       25456834//24981863//27371828//22608085 chr19:51601568-51601569(-) m6A 3'UTR       24284625//25456834//24981863//27773535//27371828//22608085 chr19:51601575-51601576(-) m6A 3'UTR       24284625//25456834//24981863//27773535//27371828//22608085 chr19:51601582-51601583(-) m1A 3'UTR       26863196 chr19:51601596-51601597(-) m6A 3'UTR       24284625//25456834//24981863//27773535//27371828//22608085 chr19:51601629-51601630(-) m6A 3'UTR       24284625//25456834//24981863//27773535//27371828//27773536//22608085 chr19:51601667-51601668(-) m6A 3'UTR       25456834//24981863//27773535//27371828//27773536//22608085 chr19:51601698-51601699(-) m6A 3'UTR       24284625//25456834//24981863//22608085 chr19:51601705-51601706(-) m6A 3'UTR       24284625//25456834//24981863//22608085 chr19:51601722-51601723(-) m6A 3'UTR       24284625//25456834//24981863//22608085 chr19:51601786-51601787(-) m6A 3'UTR       24284625//24981863//22608085 chr19:51602110-51602111(-) m6A CDS       24209618//24981863 chr19:51602155-51602156(-) m6A CDS       24209618//24981863//27371828 chr19:51602356-51602357(-) m6A CDS       24209618//27773536 chr19:51602369-51602370(-) m6A CDS       24209618//27773536 chr19:51607467-51607468(-) m6A CDS       24209618//27773536 chr19:51607638-51607639(-) m6A CDS       24209618//27773536

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	CTU1	Chromatin K562 cells     - Exosome Blood     -

Interaction Network (The top 100 interactions):

Interactor1: hbv-miR-B19-5p
Interactor2: CTU1

Evidence Support:

Prediction-Evidence	miRanda//RNAHybrid
Support Database	VmiReg