Basic Information:

  VIRBase ID:  

VHID00566406

  Virus:  

Macacine alphaherpesvirus 1 (CeHV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2381

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hbv-miR-B19-5p:  MIMAT0031769          MIDN:  NM_177401     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hbv-miR-B19-5p	MIDN
miRBase Accession/Entrez ID	MIMAT0031769	90007
Organism	Macacine alphaherpesvirus 1 (CeHV-1)	Homo sapiens
Category	miRNA	mRNA
Alias	-	Stx

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	MIDN	chr19:1256335(+) A-I      intronic chr19:1256649(+) A-I      intronic chr19:1256686(+) A-I      intronic chr19:1256695(+) A-I      intronic chr19:1256642(+) A-I      intronic

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	MIDN	chr19:1248583-1248584(+) m6A 5'UTR       24209618//25456834//24981863 chr19:1248645-1248646(+) m6A 5'UTR       24209618//25456834//24981863 chr19:1250001-1250002(+) m6A 5'UTR       24284625//24209618//25456834//24981863//27371828 chr19:1250152-1250153(+) m6A 5'UTR       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr19:1250202-1250203(+) m6A 5'UTR       24284625//24209618//25456834//24981863//22575960//22608085 chr19:1250524-1250525(+) m6A CDS       - chr19:1254322-1254323(+) m6A CDS       24284625 chr19:1254907-1254908(+) m6A CDS       24284625//24981863 chr19:1254995-1254996(+) m6A CDS       24284625 chr19:1255050-1255051(+) m6A CDS       24284625 chr19:1255444-1255445(+) m6A CDS       24284625 chr19:1255608-1255609(+) m6A CDS       24284625 chr19:1256996-1256997(+) m6A CDS       24284625//22575960 chr19:1257010-1257011(+) m6A CDS       24284625//22575960 chr19:1257017-1257018(+) m6A CDS       24284625 chr19:1257212-1257213(+) m6A CDS       24284625//24209618//24981863//22575960 chr19:1257324-1257325(+) m6A 3'UTR       24284625//24209618//24981863//22575960 chr19:1257461-1257462(+) m6A 3'UTR       24284625//24209618//25456834//24981863 chr19:1257763-1257764(+) m6A 3'UTR       26404942 chr19:1257786-1257787(+) m6A 3'UTR       26404942 chr19:1258032-1258033(+) m6A 3'UTR       24284625 chr19:1258074-1258075(+) m6A 3'UTR       24284625//24981863 chr19:1258143-1258144(+) m6A 3'UTR       24284625//24981863//26404942 chr19:1258181-1258182(+) m6A 3'UTR       25456834//24981863//26404942//27773535 chr19:1258274-1258275(+) m6A 3'UTR       24284625//25456834 chr19:1258854-1258855(+) m6A 3'UTR       27773535 chr19:1259068-1259069(+) m6A 3'UTR       27773535 chr19:1259093-1259094(+) m6A 3'UTR       27773535 chr19:1259125-1259126(+) m6A 3'UTR       27773535 chr19:1259137-1259138(+) m6A 3'UTR       27773535

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	MIDN	Chromatin K562 cells     - Exosome Blood     - Nucleolus K562 cells     - Nucleoplasm K562 cells     - Nucleus HCC cell line (HepG2)|HeLa-S3 cells     -

Interaction Network (The top 100 interactions):

Interactor1: hbv-miR-B19-5p
Interactor2: MIDN

Evidence Support:

Prediction-Evidence	miRanda//RNAHybrid//Targetscan
Support Database	VmiReg