Detail Information

Basic Information:


  VIRBase ID:  

VHID00566383

  Virus:  

Macacine alphaherpesvirus 1 (CeHV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2455

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hbv-miR-B19-5p:           TMEM209:      

      *It may take a few minutes to display results.

Interactor Information:


Interactor1 Interactor2
Symbol hbv-miR-B19-5p TMEM209
miRBase
Accession/Entrez ID		 MIMAT0031769 84928
Organism Macacine alphaherpesvirus 1 (CeHV-1) Homo sapiens
Category miRNA mRNA
Alias - NET31

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR TMEM209
chr7:129812351(-) A-I      intronic
chr7:129818743(-) A-I      intronic
chr7:129818757(-) A-I      intronic
chr7:129819565(-) A-I      intronic
chr7:129819647(-) A-I      intronic
chr7:129829222(-) A-I      intronic
chr7:129838364(-) A-I      intronic
chr7:129838319(-) A-I      intronic
chr7:129818670(-) A-I      intronic
chr7:129813066(-) A-I      intronic
chr7:129813054(-) A-I      intronic
chr7:129838404(-) A-I      intronic
chr7:129838429(-) A-I      intronic
chr7:129838432(-) A-I      intronic
chr7:129838444(-) A-I      intronic
chr7:129838446(-) A-I      intronic
chr7:129838450(-) A-I      intronic
chr7:129839075(-) A-I      intronic
chr7:129839092(-) A-I      intronic
chr7:129839155(-) A-I      intronic
chr7:129839190(-) A-I      intronic
chr7:129839196(-) A-I      intronic
chr7:129839225(-) A-I      intronic
chr7:129839226(-) A-I      intronic
chr7:129839227(-) A-I      intronic
chr7:129838302(-) A-I      intronic
chr7:129838307(-) A-I      intronic
chr7:129839228(-) A-I      intronic
chr7:129839229(-) A-I      intronic
chr7:129839265(-) A-I      intronic
chr7:129838288(-) A-I      intronic
chr7:129830725(-) A-I      intronic
chr7:129812793(-) A-I      intronic
chr7:129839154(-) A-I      intronic
chr7:129839281(-) A-I      intronic
chr7:129839294(-) A-I      intronic
chr7:129838283(-) A-I      intronic
chr7:129811867(-) A-I      intronic
chr7:129811826(-) A-I      intronic
chr7:129839306(-) A-I      intronic
chr7:129839332(-) A-I      intronic
chr7:129811797(-) A-I      intronic
chr7:129839333(-) A-I      intronic
chr7:129839341(-) A-I      intronic
chr7:129838281(-) A-I      intronic
chr7:129819746(-) A-I      intronic
chr7:129838207(-) A-I      intronic
chr7:129820337(-) A-I      intronic
chr7:129820383(-) A-I      intronic
chr7:129838188(-) A-I      intronic
chr7:129829233(-) A-I      intronic
chr7:129813047(-) A-I      intronic
chr7:129839222(-) A-I      intronic
chr7:129829236(-) A-I      intronic
chr7:129830295(-) A-I      intronic
chr7:129812352(-) A-I      intronic
chr7:129812379(-) A-I      intronic
chr7:129838294(-) A-I      intronic
chr7:129838206(-) A-I      intronic
chr7:129838316(-) A-I      intronic
chr7:129811761(-) A-I      intronic
chr7:129840866(-) A-I      3'UTR
chr7:129840797(-) A-I      3'UTR
chr7:129805411(-) A-I      3'UTR
chr7:129840817(-) A-I      3'UTR
chr7:129840740(-) A-I      3'UTR
chr7:129839218(-) A-I      intronic
chr7:129810765(-) A-I      intronic
chr7:129819772(-) A-I      intronic
chr7:129813130(-) A-I      intronic
chr7:129819672(-) A-I      intronic
chr7:129838285(-) A-I      intronic
chr7:129830246(-) A-I      intronic
chr7:129838438(-) A-I      intronic
chr7:129830275(-) A-I      intronic
chr7:129830209(-) A-I      intronic
chr7:129839088(-) A-I      intronic
chr7:129813082(-) A-I      intronic
chr7:129839089(-) A-I      intronic
chr7:129838221(-) A-I      intronic
chr7:129839186(-) A-I      intronic
chr7:129830282(-) A-I      intronic
chr7:129838339(-) A-I      intronic
chr7:129813057(-) A-I      intronic
chr7:129839310(-) A-I      intronic
chr7:129838216(-) A-I      intronic
chr7:129829099(-) A-I      intronic
Resource Symbol Editing Position Change SeqReg exReg PMID
DARNED TMEM209
chr7:129830209(-) A-I intron -    15545495
chr7:129830223(-) A-I intron -    15545495
chr7:129830242(-) A-I intron -    15545495
chr7:129830246(-) A-I intron -    15545495
chr7:129830275(-) A-I intron -    15545495
chr7:129830282(-) A-I intron -    15545495
chr7:129838335(-) A-I intron -    22327324
chr7:129838339(-) A-I intron -    22327324
chr7:129805697(-) C-T exon 3'UTR    21725310
chr7:129805819(-) C-T exon 3'UTR    21725310
chr7:129812385(-) A-G intron -    22484847
chr7:129813057(-) A-G intron -    22484847
chr7:129813082(-) A-G intron -    22484847

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase TMEM209
chr7:129804567-129804568(-) m6A 3'UTR       27773535
chr7:129804605-129804606(-) m6A 3'UTR       27773535
chr7:129804679-129804680(-) m6A 3'UTR       27773535
chr7:129804696-129804697(-) m6A 3'UTR       27773535
chr7:129821471-129821472(-) Cm CDS//exon       -
chr7:129832535-129832536(-) m6A CDS       27773535
chr7:129832612-129832613(-) m6A CDS       27773535
chr7:129841922-129841923(-) m6A CDS       24981863

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate TMEM209
Chromatin HeLa-S3 cells|K562 cells     -
Cytosol HeLa-S3 cells|K562 cells     -
Exosome Blood     -
Membrane K562 cells     -
Nucleolus K562 cells     -
Nucleoplasm K562 cells     -
Nucleus HeLa-S3 cells|K562 cells     -

Interaction Network (The top 100 interactions):


Interactor1: hbv-miR-B19-5p
Interactor2: TMEM209

Evidence Support:


Prediction-Evidence miRanda//PITA//RNAHybrid//Targetscan
Support Database VmiReg

Starting a new search, please wait ...