Detail Information

Basic Information:


  VIRBase ID:  

VHID00566108

  Virus:  

Macacine alphaherpesvirus 1 (CeHV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hbv-miR-B19-5p:           ZNF319:      

      *It may take a few minutes to display results.

Interactor Information:


Interactor1 Interactor2
Symbol hbv-miR-B19-5p ZNF319
miRBase
Accession/Entrez ID		 MIMAT0031769 57567
Organism Macacine alphaherpesvirus 1 (CeHV-1) Homo sapiens
Category miRNA mRNA
Alias - ZFP319

RNA Editing:


Resource Symbol Editing Position Change SeqReg exReg PMID
DARNED ZNF319
chr16:58030401(-) A-I exon 3'UTR    21960545

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase ZNF319
chr16:58028579-58028580(-) m6A 3'UTR       27773535
chr16:58028595-58028596(-) m6A 3'UTR       27773535
chr16:58028819-58028820(-) m6A 3'UTR       24284625//25456834//24981863
chr16:58028826-58028827(-) m6A 3'UTR       24284625//25456834//24981863
chr16:58029009-58029010(-) m6A 3'UTR       24284625//24981863
chr16:58029066-58029067(-) m6A 3'UTR       24284625//24981863
chr16:58029094-58029095(-) m6A 3'UTR       24284625//24981863
chr16:58029159-58029160(-) m6A 3'UTR       24284625//24981863
chr16:58029786-58029787(-) m6A 3'UTR       24284625
chr16:58029907-58029908(-) m6A 3'UTR       24284625
chr16:58030180-58030181(-) m6A 3'UTR       24284625//25456834//24981863//27773535//27371828//27773536//22608085
chr16:58030296-58030297(-) m6A 3'UTR       24284625//24209618//25456834//24981863//28052920//27371828//27773536//22575960//22608085
chr16:58030670-58030671(-) m6A CDS       24284625//25456834//24981863//27371828//22575960
chr16:58030700-58030701(-) m6A CDS       24284625//25456834//24981863//27371828//22575960
chr16:58030980-58030981(-) m6A CDS       24284625//25456834//24981863//27371828//22575960//22608085
chr16:58031070-58031071(-) m6A CDS       24284625//25456834//24981863//27371828//22575960//22608085
chr16:58031183-58031184(-) m6A CDS       24284625//24981863//27371828
chr16:58031581-58031582(-) m6A CDS       24284625
chr16:58031673-58031674(-) m6A CDS       24284625
chr16:58031999-58032000(-) m6A CDS       24284625//27371828//27773536
chr16:58032041-58032042(-) m6A CDS       24284625//27371828//27773536
chr16:58032190-58032191(-) m6A 5'UTR       24284625//25456834//24981863
chr16:58032211-58032212(-) m6A 5'UTR       24284625//25456834//24981863
chr16:58032382-58032383(-) m6A 5'UTR       24284625//24981863
chr16:58033469-58033470(-) m6A 5'UTR//intron       24284625//24981863
chr16:58033501-58033502(-) m6A 5'UTR//intron       24284625//24981863
chr16:58033509-58033510(-) m6A 5'UTR//intron       24284625//24981863
chr16:58033557-58033558(-) m6A 5'UTR//intron       24284625//25456834//24981863//27371828

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate ZNF319
Chromatin K562 cells     -
Exosome Blood     -
Nucleoplasm K562 cells     -

Interaction Network (The top 100 interactions):


Interactor1: hbv-miR-B19-5p
Interactor2: ZNF319

Evidence Support:


Prediction-Evidence miRanda//RNAHybrid
Support Database VmiReg

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