Detail Information

Basic Information:


  VIRBase ID:  

VHID00566044

  Virus:  

Macacine alphaherpesvirus 1 (CeHV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2455

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hbv-miR-B19-5p:           RPRM:      

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Interactor Information:


Interactor1 Interactor2
Symbol hbv-miR-B19-5p RPRM
miRBase
Accession/Entrez ID
MIMAT0031769 56475
Organism Macacine alphaherpesvirus 1 (CeHV-1) Homo sapiens
Category miRNA mRNA
Alias - REPRIMO

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase RPRM
chr2:154334321-154334322(-) m6A 3'UTR       24284625//25456834//24981863//27773536//22608085
chr2:154334381-154334382(-) m6A 3'UTR       24284625//25456834//24981863//27773536//22575960//22608085
chr2:154334460-154334461(-) m6A 3'UTR       24284625//25456834//24981863//27773535//27773536//22575960//22608085
chr2:154334496-154334497(-) m6A 3'UTR       24284625//25456834//24981863//27773535//27773536//22575960//22608085
chr2:154334538-154334539(-) m6A 3'UTR       24284625//25456834//24981863//27773535//27773536//22575960//22608085
chr2:154334545-154334546(-) m6A 3'UTR       24284625//25456834//24981863//27773535//27773536//22575960//22608085
chr2:154334657-154334658(-) m6A 3'UTR       24284625//25456834//24981863//22575960//22608085
chr2:154334671-154334672(-) m6A 3'UTR       24284625//25456834//24981863//22575960//22608085
chr2:154334798-154334799(-) m6A CDS       24284625//25456834//22575960//22608085
chr2:154335113-154335114(-) m6A 5'UTR       25456834//27773536
chr2:154335215-154335216(-) m6A 5'UTR       25456834//24981863//27773536
chr2:154335232-154335233(-) m6A 5'UTR       25456834//24981863//27773536

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate RPRM
Exosome Blood     -

Interaction Network (The top 100 interactions):


Interactor1: hbv-miR-B19-5p
Interactor2: RPRM

Evidence Support:


Prediction-Evidence miRanda//PITA//RNAHybrid//Targetscan
Support Database VmiReg

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