Basic Information:

  VIRBase ID:  

VHID00566037

  Virus:  

Macacine alphaherpesvirus 1 (CeHV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2455

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hbv-miR-B19-5p:  MIMAT0031769          PCDHB11:  NM_018931     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hbv-miR-B19-5p	PCDHB11
miRBase Accession/Entrez ID	MIMAT0031769	56125
Organism	Macacine alphaherpesvirus 1 (CeHV-1)	Homo sapiens
Category	miRNA	mRNA
Alias	-	ME2//PCDH-BETA11

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	PCDHB11	chr5:140582153(+) A-I      3'UTR chr5:140582061(+) A-I      3'UTR chr5:140582064(+) A-I      3'UTR

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	PCDHB11	chr5:140579434-140579435(+) m6A CDS//intron       24981863 chr5:140579498-140579499(+) m6A CDS//intron       24284625//25456834//24981863 chr5:140579520-140579521(+) m6A CDS//intron       24284625//25456834//24981863 chr5:140579562-140579563(+) m6A CDS//intron       24284625//24209618//24981863 chr5:140579579-140579580(+) m6A CDS//intron       24284625//24209618//24981863 chr5:140579585-140579586(+) m6A CDS//intron       24284625//24209618//24981863 chr5:140579611-140579612(+) m6A CDS//intron       24284625//24209618//24981863 chr5:140579618-140579619(+) m6A CDS//intron       24981863 chr5:140580019-140580020(+) m6A CDS//intron       24981863 chr5:140580047-140580048(+) m6A CDS//intron       24981863 chr5:140580155-140580156(+) m6A 5'UTR//CDS       24209618//24981863 chr5:140580163-140580164(+) m6A 5'UTR//CDS       24209618//24981863 chr5:140580217-140580218(+) m6A 5'UTR//CDS       24981863 chr5:140580324-140580325(+) m6A 5'UTR//CDS       24981863 chr5:140580433-140580434(+) m6A 5'UTR//CDS       24209618//24981863 chr5:140580467-140580468(+) m6A CDS       24209618//24981863 chr5:140580476-140580477(+) m6A CDS       24209618//24981863 chr5:140580509-140580510(+) m6A CDS       24209618//24981863 chr5:140580559-140580560(+) m6A CDS       24284625//24209618//24981863 chr5:140580567-140580568(+) m6A CDS       24284625//24981863 chr5:140580575-140580576(+) m6A CDS       24284625//24981863 chr5:140580643-140580644(+) m6A CDS       24284625 chr5:140580706-140580707(+) m6A CDS       24284625 chr5:140580734-140580735(+) m6A CDS       24284625 chr5:140580776-140580777(+) m6A CDS       24284625 chr5:140580782-140580783(+) m6A CDS       24284625 chr5:140580830-140580831(+) m6A CDS       24284625 chr5:140580872-140580873(+) m6A CDS       24284625 chr5:140581576-140581577(+) m6A CDS       24209618 chr5:140581627-140581628(+) m6A CDS       24209618 chr5:140581650-140581651(+) m6A CDS       24209618

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	PCDHB11	Exosome Blood     - Nucleus Nasopharyngeal carcinoma cells     20498841

Interaction Network (The top 100 interactions):

Interactor1: hbv-miR-B19-5p
Interactor2: PCDHB11

Evidence Support:

Prediction-Evidence	miRanda//PITA//RNAHybrid//Targetscan
Support Database	VmiReg