Basic Information:

  VIRBase ID:  

VHID00565804

  Virus:  

Macacine alphaherpesvirus 1 (CeHV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2455

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hbv-miR-B19-5p:  MIMAT0031769          SMPDL3B:  NM_014474     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hbv-miR-B19-5p	SMPDL3B
miRBase Accession/Entrez ID	MIMAT0031769	27293
Organism	Macacine alphaherpesvirus 1 (CeHV-1)	Homo sapiens
Category	miRNA	mRNA
Alias	-	ASML3B

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	SMPDL3B	chr1:28272805(+) A-I      intronic chr1:28277363(+) A-I      intronic chr1:28269090(+) A-I      intronic chr1:28270927(+) A-I      intronic chr1:28272609(+) A-I      intronic chr1:28272610(+) A-I      intronic chr1:28277242(+) A-I      intronic chr1:28272814(+) A-I      intronic chr1:28272753(+) A-I      intronic chr1:28270366(+) A-I      intronic chr1:28274022(+) A-I      intronic chr1:28272730(+) A-I      intronic chr1:28272827(+) A-I      intronic chr1:28272852(+) A-I      intronic chr1:28274035(+) A-I      intronic chr1:28274283(+) A-I      intronic chr1:28274294(+) A-I      intronic chr1:28274296(+) A-I      intronic chr1:28277018(+) A-I      intronic chr1:28277191(+) A-I      intronic chr1:28278233(+) A-I      intronic chr1:28278249(+) A-I      intronic chr1:28278275(+) A-I      intronic chr1:28278299(+) A-I      intronic chr1:28278302(+) A-I      intronic chr1:28270333(+) A-I      intronic chr1:28270334(+) A-I      intronic

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	SMPDL3B	chr1:28261562-28261563(+) m6A 5'UTR       25456834//24981863 chr1:28261569-28261570(+) m6A 5'UTR//exon       25456834//24981863 chr1:28261583-28261584(+) m6A 5'UTR//exon       25456834//24981863 chr1:28261618-28261619(+) m6A 5'UTR//exon       25456834//24981863 chr1:28261643-28261644(+) m6A 5'UTR//exon       25456834//24981863 chr1:28282743-28282744(+) m6A 3'UTR//intron       24981863 chr1:28285119-28285120(+) m6A 3'UTR//CDS       22608085 chr1:28285242-28285243(+) m6A 3'UTR//CDS       24284625//25456834//24981863//22608085 chr1:28285450-28285451(+) m6A 3'UTR       24284625//24209618//25456834//24981863//22608085 chr1:28285461-28285462(+) m6A 3'UTR       24284625//24209618//25456834//24981863//22608085 chr1:28285545-28285546(+) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//22608085 chr1:28285558-28285559(+) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//22608085 chr1:28285569-28285570(+) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//22608085 chr1:28285593-28285594(+) m6A 3'UTR       24284625//24209618//25456834//24981863//22608085 chr1:28285641-28285642(+) m6A 3'UTR       24981863//22608085

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	SMPDL3B	Chromatin K562 cells     - Exosome Blood     - Nucleus HeLa-S3 cells     -

Interaction Network (The top 100 interactions):

Interactor1: hbv-miR-B19-5p
Interactor2: SMPDL3B

Evidence Support:

Prediction-Evidence	miRanda//PITA//RNAHybrid//Targetscan
Support Database	VmiReg