Basic Information:

  VIRBase ID:  

VHID00565581

  Virus:  

Macacine alphaherpesvirus 1 (CeHV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2455

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hbv-miR-B19-5p:  MIMAT0031769          SLC26A1:  NM_213613     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	hbv-miR-B19-5p	SLC26A1
miRBase Accession/Entrez ID	MIMAT0031769	10861
Organism	Macacine alphaherpesvirus 1 (CeHV-1)	Homo sapiens
Category	miRNA	mRNA
Alias	-	CAON//EDM4//SAT-1//SAT1

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	SLC26A1	chr4:978471(-) A-I      intronic chr4:978475(-) A-I      intronic chr4:978481(-) A-I      intronic chr4:978497(-) A-I      intronic chr4:979742(-) A-I      intronic chr4:979730(-) A-I      intronic chr4:979956(-) A-I      intronic chr4:975331(-) A-I      intronic chr4:978519(-) A-I      intronic chr4:977792(-) A-I      intronic chr4:975146(-) A-I      intronic chr4:977684(-) A-I      intronic chr4:978462(-) A-I      intronic chr4:979826(-) A-I      intronic chr4:977777(-) A-I      intronic chr4:975677(-) A-I      intronic chr4:979770(-) A-I      intronic chr4:978362(-) A-I      intronic chr4:975787(-) A-I      intronic chr4:979827(-) A-I      intronic chr4:979922(-) A-I      intronic chr4:979762(-) A-I      intronic chr4:978427(-) A-I      intronic chr4:978439(-) A-I      intronic chr4:978447(-) A-I      intronic chr4:978541(-) A-I      intronic chr4:978356(-) A-I      intronic chr4:975746(-) A-I      intronic chr4:975143(-) A-I      intronic chr4:975676(-) A-I      intronic chr4:980493(-) A-I      intronic chr4:977680(-) A-I      intronic chr4:975350(-) A-I      intronic chr4:978453(-) A-I      intronic chr4:975680(-) A-I      intronic chr4:978456(-) A-I      intronic chr4:975729(-) A-I      intronic chr4:975719(-) A-I      intronic chr4:975788(-) A-I      intronic chr4:975155(-) A-I      intronic

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	SLC26A1	chr4:981515-981516(-) m6A 3'UTR//intron       - chr4:981589-981590(-) m6A 3'UTR//intron       - chr4:981700-981701(-) m6A 3'UTR//intron       24284625 chr4:981754-981755(-) m6A 3'UTR//intron       - chr4:981828-981829(-) m6A 3'UTR//intron       - chr4:981870-981871(-) m6A 3'UTR//intron       - chr4:981947-981948(-) m6A 3'UTR//intron       - chr4:982018-982019(-) m6A 3'UTR//intron       - chr4:982068-982069(-) m6A 3'UTR//intron       - chr4:982257-982258(-) m6A 3'UTR//intron       24981863//27773535 chr4:982301-982302(-) m6A 3'UTR//intron       24981863//27773535 chr4:982399-982400(-) m6A 3'UTR//intron       24981863//27773535 chr4:982414-982415(-) m6A 3'UTR//intron       24981863//27773535 chr4:982431-982432(-) m6A 3'UTR//intron       24981863//27773535 chr4:982437-982438(-) m6A 3'UTR//intron       24981863//27773535 chr4:982476-982477(-) m6A 3'UTR//intron       27773535 chr4:982484-982485(-) m6A 3'UTR//intron       27773535 chr4:982545-982546(-) m6A 3'UTR//intron       27773535 chr4:982578-982579(-) m6A 3'UTR//intron       27773535 chr4:982670-982671(-) m6A CDS//intron       - chr4:982720-982721(-) m6A CDS//intron       - chr4:982762-982763(-) m6A CDS//intron       24981863 chr4:982819-982820(-) m6A CDS//intron       24981863 chr4:982831-982832(-) m6A CDS//intron       24981863 chr4:982951-982952(-) m6A CDS//intron       24284625 chr4:983071-983072(-) m6A CDS//intron       24284625//25456834//24981863 chr4:983173-983174(-) m6A CDS//intron       24284625//25456834//24981863//22608085 chr4:983350-983351(-) m6A CDS//intron       - chr4:983492-983493(-) m6A CDS//intron       24284625 chr4:983510-983511(-) m6A CDS//intron       24284625 chr4:983881-983882(-) m6A CDS//intron       24284625 chr4:984039-984040(-) m6A CDS//intron       24284625//25456834//24981863//22575960//22608085 chr4:984982-984983(-) m6A CDS//exon       24284625 chr4:985078-985079(-) m6A CDS       24284625 chr4:985336-985337(-) m6A CDS       24284625//24981863//22575960//22608085 chr4:985505-985506(-) m6A 5'UTR       24284625//24981863//22575960//22608085 chr4:986570-986571(-) m6A 5'UTR//intron       24284625//24981863//22575960//22608085 chr4:986593-986594(-) m6A 5'UTR//intron       24284625//24981863//22575960//22608085 chr4:986598-986599(-) m6A 5'UTR//intron       24284625//24981863//22575960//22608085 chr4:986715-986716(-) m6A 5'UTR//intron       24284625//24981863 chr4:987097-987098(-) m6A 5'UTR       24284625//24981863

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	SLC26A1	Chromatin K562 cells     - Cytosol HeLa-S3 cells     - Exosome Blood     - Nucleoplasm K562 cells     - Nucleus HCC cell line (HepG2)     -

Interaction Network (The top 100 interactions):

Interactor1: hbv-miR-B19-5p
Interactor2: SLC26A1

Evidence Support:

Prediction-Evidence	miRanda//PITA//RNAHybrid//Targetscan
Support Database	VmiReg