Basic Information:

  VIRBase ID:  

VHID00565255

  Virus:  

Macacine alphaherpesvirus 1 (CeHV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2455

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hbv-miR-B19-5p:  MIMAT0031769          SNAPC3:  NR_161449     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	hbv-miR-B19-5p	SNAPC3
miRBase Accession/Entrez ID	MIMAT0031769	6619
Organism	Macacine alphaherpesvirus 1 (CeHV-1)	Homo sapiens
Category	miRNA	mRNA
Alias	-	PTFbeta//SNAP50

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	SNAPC3	chr9:15446443(+) A-I      intronic chr9:15446414(+) A-I      intronic chr9:15446371(+) A-I      intronic chr9:15446344(+) A-I      intronic chr9:15444993(+) A-I      intronic chr9:15428386(+) A-I      intronic chr9:15434639(+) A-I      intronic chr9:15457532(+) A-I      intronic chr9:15456545(+) A-I      intronic chr9:15427513(+) A-I      intronic chr9:15454703(+) A-I      intronic chr9:15444928(+) A-I      intronic chr9:15444929(+) A-I      intronic chr9:15444971(+) A-I      intronic chr9:15444976(+) A-I      intronic chr9:15444980(+) A-I      intronic chr9:15427446(+) A-I      intronic chr9:15427426(+) A-I      intronic chr9:15427411(+) A-I      intronic chr9:15435351(+) A-I      intronic chr9:15454169(+) A-I      intronic chr9:15456655(+) A-I      intronic chr9:15446377(+) A-I      intronic chr9:15457542(+) A-I      intronic chr9:15457548(+) A-I      intronic chr9:15456663(+) A-I      intronic chr9:15451578(+) A-I      intronic chr9:15456700(+) A-I      intronic chr9:15451585(+) A-I      intronic chr9:15446444(+) A-I      intronic chr9:15456621(+) A-I      intronic chr9:15434535(+) A-I      intronic chr9:15435474(+) A-I      intronic chr9:15435477(+) A-I      intronic chr9:15456182(+) A-I      intronic chr9:15455822(+) A-I      intronic chr9:15456289(+) A-I      intronic chr9:15455494(+) A-I      intronic chr9:15455493(+) A-I      intronic chr9:15455480(+) A-I      intronic chr9:15455454(+) A-I      intronic chr9:15455418(+) A-I      intronic chr9:15455403(+) A-I      intronic chr9:15454711(+) A-I      intronic chr9:15454069(+) A-I      intronic chr9:15435890(+) A-I      intronic chr9:15444948(+) A-I      intronic chr9:15451601(+) A-I      intronic chr9:15460610(+) A-I      3'UTR chr9:15460589(+) A-I      3'UTR chr9:15460569(+) A-I      3'UTR chr9:15460458(+) A-I      3'UTR chr9:15460641(+) A-I      3'UTR chr9:15462065(+) A-I      3'UTR chr9:15460649(+) A-I      3'UTR chr9:15460665(+) A-I      3'UTR chr9:15460652(+) A-I      3'UTR chr9:15460650(+) A-I      3'UTR chr9:15462052(+) A-I      3'UTR chr9:15460618(+) A-I      3'UTR chr9:15460632(+) A-I      3'UTR chr9:15460663(+) A-I      3'UTR chr9:15462022(+) A-I      3'UTR chr9:15462008(+) A-I      3'UTR chr9:15462031(+) A-I      3'UTR chr9:15461334(+) A-I      3'UTR chr9:15461399(+) A-I      3'UTR chr9:15462007(+) A-I      3'UTR chr9:15461394(+) A-I      3'UTR chr9:15460586(+) A-I      3'UTR chr9:15460623(+) A-I      3'UTR chr9:15455807(+) A-I      intronic chr9:15435475(+) A-I      intronic chr9:15457489(+) A-I      intronic chr9:15456701(+) A-I      intronic chr9:15455485(+) A-I      intronic chr9:15457411(+) A-I      intronic chr9:15456541(+) A-I      intronic chr9:15456649(+) A-I      intronic chr9:15454079(+) A-I      intronic chr9:15427395(+) A-I      intronic chr9:15456632(+) A-I      intronic chr9:15434545(+) A-I      intronic chr9:15457331(+) A-I      intronic chr9:15456595(+) A-I      intronic chr9:15436064(+) A-I      intronic chr9:15456288(+) A-I      intronic chr9:15435395(+) A-I      intronic chr9:15457441(+) A-I      intronic chr9:15427421(+) A-I      intronic chr9:15456191(+) A-I      intronic chr9:15457407(+) A-I      intronic chr9:15455777(+) A-I      intronic chr9:15457479(+) A-I      intronic chr9:15460617(+) A-I      3'UTR chr9:15460611(+) A-I      3'UTR chr9:15460651(+) A-I      3'UTR chr9:15461382(+) A-I      3'UTR chr9:15463327(+) A-I      3'UTR chr9:15461395(+) A-I      3'UTR chr9:15460412(+) A-I      3'UTR chr9:15460572(+) A-I      3'UTR chr9:15461374(+) A-I      3'UTR chr9:15461252(+) A-I      3'UTR chr9:15461440(+) A-I      3'UTR chr9:15460440(+) A-I      3'UTR chr9:15461211(+) A-I      3'UTR chr9:15461271(+) A-I      3'UTR chr9:15460609(+) A-I      3'UTR chr9:15461197(+) A-I      3'UTR chr9:15460442(+) A-I      3'UTR chr9:15463322(+) A-I      3'UTR chr9:15460453(+) A-I      3'UTR chr9:15461326(+) A-I      3'UTR chr9:15463326(+) A-I      3'UTR chr9:15445037(+) A-I      intronic chr9:15454817(+) A-I      intronic chr9:15456583(+) A-I      intronic chr9:15427925(+) A-I      intronic chr9:15452499(+) A-I      intronic chr9:15456208(+) A-I      intronic chr9:15454758(+) A-I      intronic chr9:15435639(+) A-I      intronic chr9:15455796(+) A-I      intronic chr9:15437370(+) A-I      intronic chr9:15457537(+) A-I      intronic chr9:15455514(+) A-I      intronic chr9:15454770(+) A-I      intronic chr9:15427486(+) A-I      intronic chr9:15435338(+) A-I      intronic chr9:15455553(+) A-I      intronic chr9:15454785(+) A-I      intronic chr9:15455332(+) A-I      intronic chr9:15439108(+) A-I      intronic chr9:15455363(+) A-I      intronic chr9:15435582(+) A-I      intronic chr9:15454148(+) A-I      intronic chr9:15456728(+) A-I      intronic chr9:15455486(+) A-I      intronic chr9:15454084(+) A-I      intronic chr9:15436922(+) A-I      intronic chr9:15430416(+) A-I      intronic chr9:15434547(+) A-I      intronic chr9:15435451(+) A-I      intronic chr9:15454094(+) A-I      intronic chr9:15457543(+) A-I      intronic chr9:15454034(+) A-I      intronic chr9:15456600(+) A-I      intronic chr9:15435450(+) A-I      intronic chr9:15446338(+) A-I      intronic chr9:15434642(+) A-I      intronic chr9:15437292(+) A-I      intronic chr9:15453979(+) A-I      intronic chr9:15435916(+) A-I      intronic chr9:15455814(+) A-I      intronic chr9:15455506(+) A-I      intronic chr9:15453981(+) A-I      intronic chr9:15427520(+) A-I      intronic chr9:15427528(+) A-I      intronic chr9:15436039(+) A-I      intronic chr9:15455400(+) A-I      intronic chr9:15455766(+) A-I      intronic chr9:15454939(+) A-I      intronic chr9:15455836(+) A-I      intronic chr9:15456282(+) A-I      intronic chr9:15454767(+) A-I      intronic chr9:15454177(+) A-I      intronic chr9:15456569(+) A-I      intronic chr9:15455800(+) A-I      intronic chr9:15427531(+) A-I      intronic chr9:15435645(+) A-I      intronic chr9:15457446(+) A-I      intronic chr9:15435307(+) A-I      intronic chr9:15454782(+) A-I      intronic chr9:15455340(+) A-I      intronic chr9:15456540(+) A-I      intronic chr9:15434586(+) A-I      intronic chr9:15427994(+) A-I      intronic chr9:15455507(+) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	SNAPC3	chr9:15427421(+) A-G intron -    22484847 chr9:15454782(+) A-G intron -    22484847 chr9:15454785(+) A-G intron -    22484847 chr9:15455506(+) A-G intron -    22484847 chr9:15455507(+) A-G intron -    22484847 chr9:15455514(+) A-G intron -    22484847 chr9:15456674(+) T-C intron -    22484847 chr9:15457407(+) A-G intron -    22484847 chr9:15457411(+) A-G intron -    22484847 chr9:15457446(+) A-G intron -    22484847 chr9:15460617(+) A-G intron -    22484847 chr9:15461211(+) A-G intron -    22484847 chr9:15461395(+) A-G intron -    22484847

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	SNAPC3	chr9:15422875-15422876(+) m6A 5'UTR       24981863 chr9:15422932-15422933(+) m6A CDS       24981863 chr9:15423148-15423149(+) m6A CDS//exon       22575960 chr9:15423915-15423916(+) m6A CDS//exon       22575960 chr9:15433593-15433594(+) Tm CDS//exon       - chr9:15459812-15459813(+) m6A CDS       24981863 chr9:15459852-15459853(+) m6A CDS       24981863//22608085 chr9:15459950-15459951(+) m6A 3'UTR       24981863//22608085 chr9:15459966-15459967(+) m6A 3'UTR       24981863//22608085 chr9:15461667-15461668(+) m6A 3'UTR       24981863 chr9:15461671-15461672(+) m6A 3'UTR       24981863 chr9:15461693-15461694(+) m6A 3'UTR       24981863 chr9:15461702-15461703(+) m6A 3'UTR       24981863 chr9:15461744-15461745(+) m6A 3'UTR       24981863 chr9:15464089-15464090(+) m6A 3'UTR//intron       27773535 chr9:15464106-15464107(+) m6A 3'UTR//intron       24981863//27773535//22608085 chr9:15465640-15465641(+) m6A 3'UTR       24981863//27773535//27371828//22608085 chr9:15465666-15465667(+) m6A 3'UTR       24981863//27773535//27371828//22608085 chr9:15465678-15465679(+) m6A 3'UTR       24981863//27773535//27371828//22608085 chr9:15465684-15465685(+) m6A 3'UTR       24981863//27773535//27371828//22608085 chr9:15465693-15465694(+) m6A 3'UTR       24981863//27773535//27371828//22608085 chr9:15465704-15465705(+) m6A 3'UTR       24981863//27773535//27371828//22608085 chr9:15465722-15465723(+) m6A 3'UTR       22608085 chr9:15465752-15465753(+) m6A 3'UTR       22608085

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	SNAPC3	Chromatin K562 cells     - Cytosol Human myelogenous leukemia cell line (K-562)     21613539 Exosome Plasma     23663360 Exosome Blood     - Nucleoplasm K562 cells     - Nucleus HeLa-S3 cells|K562 cells     - Ribosome Colon cancer cells     24393600

Interaction Network (The top 100 interactions):

Interactor1: hbv-miR-B19-5p
Interactor2: SNAPC3

Evidence Support:

Prediction-Evidence	miRanda//PITA//RNAHybrid//Targetscan
Support Database	VmiReg