Basic Information:

  VIRBase ID:  

VHID00564798

  Virus:  

Macacine alphaherpesvirus 1 (CeHV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2455

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hbv-miR-B19-5p:  MIMAT0031769          RHOB:  NM_004040     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hbv-miR-B19-5p	RHOB
miRBase Accession/Entrez ID	MIMAT0031769	388
Organism	Macacine alphaherpesvirus 1 (CeHV-1)	Homo sapiens
Category	miRNA	mRNA
Alias	-	ARH6//ARHB//MST081//MSTP081//RHOH6

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	RHOB	chr2:20646893-20646894(+) m6A 5'UTR       24284625//24209618//25456834//24981863//22575960//22608085 chr2:20647347-20647348(+) m6A CDS       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr2:20647401-20647402(+) m6A CDS       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr2:20647419-20647420(+) m6A CDS       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr2:20647452-20647453(+) m6A CDS       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr2:20647485-20647486(+) m6A CDS       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr2:20647494-20647495(+) m6A CDS       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr2:20647506-20647507(+) m6A CDS       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr2:20647584-20647585(+) m6A CDS       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr2:20647636-20647637(+) m6A CDS       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr2:20647712-20647713(+) m6A CDS       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr2:20647866-20647867(+) m6A 3'UTR       24284625//24209618//25456834//24981863//26404942//27773536//22575960//22608085 chr2:20647897-20647898(+) m6A 3'UTR       24284625//24209618//25456834//24981863//26404942//27773536//22575960//22608085 chr2:20647914-20647915(+) m6A 3'UTR       24284625//24209618//25456834//24981863//26404942//27773536//22575960//22608085 chr2:20647967-20647968(+) m6A 3'UTR       24284625//24209618//25456834//24981863//26404942//27773536//22575960//22608085 chr2:20648254-20648255(+) m6A 3'UTR       24284625//24209618//24981863//26404942//27773535//22575960//22608085 chr2:20648396-20648397(+) m6A 3'UTR       24284625//24209618//25456834//24981863//26404942//27773535//22575960//22608085 chr2:20648414-20648415(+) m6A 3'UTR       24284625//24209618//25456834//24981863//26404942//27773535//22575960//22608085 chr2:20648419-20648420(+) m6A 3'UTR       24284625//24209618//25456834//24981863//26404942//27773535//22575960//22608085 chr2:20648449-20648450(+) m6A 3'UTR       24284625//24209618//25456834//24981863//26404942//27773535//22575960//22608085 chr2:20648473-20648474(+) m6A 3'UTR       24284625//24209618//25456834//24981863//26404942//27773535//22575960//22608085 chr2:20648517-20648518(+) m6A 3'UTR       24284625//24209618//25456834//24981863//26404942//27773535//22575960//22608085 chr2:20648582-20648583(+) m6A 3'UTR       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr2:20648625-20648626(+) m6A 3'UTR       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr2:20648817-20648818(+) m6A 3'UTR       24981863//26404942//27773535

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	RHOB	Cytosol Human myelogenous leukemia cell line (K-562)     21613539 Cytosol HeLa-S3 cells     - Exosome Blood     - Membrane HCC cell line (HepG2)     - Nucleus HeLa-S3 cells     - Ribosome Colon cancer cells     24393600

Interaction Network (The top 100 interactions):

Interactor1: hbv-miR-B19-5p
Interactor2: RHOB

Evidence Support:

Prediction-Evidence	miRanda//PITA//RNAHybrid//Targetscan
Support Database	VmiReg