Basic Information:

  VIRBase ID:  

VHID00564314

  Virus:  

Macacine alphaherpesvirus 1 (CeHV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2455

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hbv-miR-B8-3p:  MIMAT0031768          CCDC107:  NM_001195200     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hbv-miR-B8-3p	CCDC107
miRBase Accession/Entrez ID	MIMAT0031768	203260
Organism	Macacine alphaherpesvirus 1 (CeHV-1)	Homo sapiens
Category	miRNA	mRNA
Alias	-	PSEC0222

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	CCDC107	chr9:35660409-35660410(+) m6A CDS       - chr9:35660502-35660503(+) m6A 3'UTR//intron       24284625//24981863//27371828 chr9:35660591-35660592(+) m6A 3'UTR//CDS       24284625 chr9:35660607-35660608(+) m6A 3'UTR//CDS       24284625//27773535 chr9:35660628-35660629(+) m6A 3'UTR//CDS       24284625//24981863//27773535 chr9:35660705-35660706(+) m6A 3'UTR//intron       24284625//24981863//27773535 chr9:35660730-35660731(+) m6A 3'UTR//intron       24284625//24209618//24981863//27773535//22575960//22608085 chr9:35660780-35660781(+) m6A 3'UTR//CDS       24284625//24209618//25456834//24981863//26404942//27773535//22575960//22608085 chr9:35660794-35660795(+) m6A 3'UTR//CDS       24284625//24209618//25456834//24981863//26404942//27773535//22575960//22608085 chr9:35660828-35660829(+) m6A 3'UTR//CDS       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr9:35660850-35660851(+) m6A 3'UTR//CDS       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr9:35660891-35660892(+) m6A 3'UTR//CDS//intron       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr9:35660905-35660906(+) m6A 3'UTR//CDS//intron       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr9:35660911-35660912(+) m6A 3'UTR//CDS//intron       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr9:35660946-35660947(+) m6A 3'UTR//CDS       24284625//24209618//25456834//24981863//27773535//22575960//22608085 chr9:35660960-35660961(+) m6A 3'UTR//CDS       24284625//24209618//25456834//24981863//27773535//22575960//22608085 chr9:35661023-35661024(+) m6A 3'UTR//CDS       24284625//24209618//25456834//24981863//27773535//22575960//22608085 chr9:35661037-35661038(+) m6A 3'UTR//CDS       24284625//24209618//25456834//24981863//27773535//22575960//22608085 chr9:35661044-35661045(+) m6A 3'UTR//CDS       24284625//24209618//25456834//24981863//27773535//22575960//22608085 chr9:35661075-35661076(+) m6A 3'UTR//CDS       24284625//24209618//25456834//24981863//27773535//22575960//22608085 chr9:35661165-35661166(+) m6A 3'UTR//CDS       24284625//24209618//25456834//24981863//27773535//22608085 chr9:35661249-35661250(+) m6A 3'UTR       24981863 chr9:35661285-35661286(+) m6A 3'UTR       24981863 chr9:35661413-35661414(+) m6A 3'UTR       24981863 chr9:35661419-35661420(+) m6A 3'UTR       24981863 chr9:35661452-35661453(+) m6A 3'UTR       24981863 chr9:35661489-35661490(+) m6A 3'UTR       24981863

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	CCDC107	Chromatin K562 cells     - Endoplasmic reticulum Human myelogenous leukemia cell line (K-562)     21613539 Exosome Blood     -

Interaction Network (The top 100 interactions):

Interactor1: hbv-miR-B8-3p
Interactor2: CCDC107

Evidence Support:

Prediction-Evidence	miRanda//PITA//RNAHybrid//Targetscan
Support Database	VmiReg