Basic Information:

  VIRBase ID:  

VHID00563590

  Virus:  

Macacine alphaherpesvirus 1 (CeHV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2455

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hbv-miR-B8-3p:  MIMAT0031768          TRIM11:  NM_145214     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hbv-miR-B8-3p	TRIM11
miRBase Accession/Entrez ID	MIMAT0031768	81559
Organism	Macacine alphaherpesvirus 1 (CeHV-1)	Homo sapiens
Category	miRNA	mRNA
Alias	-	BIA1//RNF92

RNA Editing:

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	TRIM11	chr1:228591450(-) A-C intron -    22484847

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	TRIM11	chr1:228581542-228581543(-) m6A 3'UTR       24284625 chr1:228581618-228581619(-) m6A 3'UTR       24284625 chr1:228581825-228581826(-) m6A 3'UTR       24284625//24981863 chr1:228581831-228581832(-) m6A 3'UTR       24284625//24981863 chr1:228582089-228582090(-) m6A 3'UTR       24284625//27773535 chr1:228582192-228582193(-) m6A 3'UTR       24284625//24209618//25456834//24981863//28052920//27773535//27371828//22575960//22608085 chr1:228582233-228582234(-) m6A 3'UTR       24284625//24209618//25456834//24981863//28052920//27773535//27371828//22575960//22608085 chr1:228582257-228582258(-) m6A 3'UTR       24284625//24209618//25456834//24981863//28052920//27773535//27371828//22575960//22608085 chr1:228582290-228582291(-) m6A 3'UTR       24284625//24209618//25456834//24981863//28052920//27773535//27371828//22575960//22608085 chr1:228582330-228582331(-) m6A 3'UTR       24284625//24209618//25456834//24981863//28052920//27773535//27371828//22575960//22608085 chr1:228582424-228582425(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085 chr1:228582573-228582574(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//27773536//22575960//22608085 chr1:228582586-228582587(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//27773536//22575960//22608085 chr1:228582616-228582617(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//27773536//22575960//22608085 chr1:228582721-228582722(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//27773536//22575960//22608085 chr1:228582763-228582764(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//27773536//22575960//22608085 chr1:228582853-228582854(-) m6A CDS       24284625//24209618//25456834//24981863//27371828//27773536//22575960//22608085 chr1:228582874-228582875(-) m6A CDS       24284625//24209618//25456834//24981863//27371828//27773536//22575960//22608085 chr1:228582898-228582899(-) m6A CDS       24284625//24209618//25456834//24981863//27371828//27773536//22575960//22608085 chr1:228582931-228582932(-) m6A CDS//exon       24284625//24209618//25456834//24981863//27371828//27773536//22575960//22608085 chr1:228582937-228582938(-) m6A CDS//exon       24284625//24209618//25456834//24981863//27371828//27773536//22575960//22608085 chr1:228583246-228583247(-) m6A 3'UTR//intron       24284625//25456834//24981863//27773535//27371828//27773536//22575960//22608085 chr1:228583397-228583398(-) m6A 3'UTR//intron       24284625//25456834//24981863//27773535//27371828//22608085 chr1:228583420-228583421(-) m6A 3'UTR//intron       24284625//25456834//24981863//27773535//27371828//22608085 chr1:228583430-228583431(-) m6A 3'UTR//intron       24284625//25456834//24981863//27773535//27371828//22608085 chr1:228583443-228583444(-) m6A 3'UTR//intron       24284625//25456834//24981863//27773535//27371828//22608085 chr1:228583529-228583530(-) m6A 3'UTR//intron       24284625//24209618//25456834//24981863//27773535//27371828//22608085 chr1:228583575-228583576(-) m6A 3'UTR//intron       24284625//24209618//25456834//24981863//27773535//27371828//22608085 chr1:228583632-228583633(-) m6A 3'UTR//intron       24284625//25456834//24981863//27371828//22608085 chr1:228583719-228583720(-) m6A 3'UTR//intron       24284625//25456834//24981863//27371828//22608085 chr1:228583731-228583732(-) m6A 3'UTR//intron       24284625//25456834//24981863//27371828//22608085 chr1:228583956-228583957(-) m6A 3'UTR//intron       27371828 chr1:228584059-228584060(-) m6A 3'UTR//intron       24284625//25456834//24981863//27371828//22608085 chr1:228584151-228584152(-) m6A 3'UTR//intron       24284625//25456834//24981863//27371828//22608085 chr1:228584226-228584227(-) m6A 3'UTR//intron       24284625//25456834//24981863//27773535//27371828//22608085 chr1:228584330-228584331(-) m6A 3'UTR//intron       24284625//24981863//27773535//27371828//22608085 chr1:228584361-228584362(-) m6A 3'UTR//CDS//intron       24284625//24981863//27773535//27371828//22608085 chr1:228584400-228584401(-) m6A 3'UTR//CDS//intron       24284625//24981863//27773535//27371828//22608085 chr1:228584457-228584458(-) m6A 3'UTR//CDS//intron       24284625//27773535//27371828 chr1:228584543-228584544(-) m6A 3'UTR//CDS//intron       24284625//25456834//24981863//27371828//22608085 chr1:228584592-228584593(-) m6A 3'UTR//CDS//intron       24284625//25456834//24981863//27371828//22608085 chr1:228584603-228584604(-) m6A 3'UTR//CDS//intron       24284625//25456834//24981863//27371828//22608085 chr1:228584665-228584666(-) m6A 3'UTR//CDS//exon       24284625//25456834//24981863//27371828//22608085 chr1:228584675-228584676(-) m6A 3'UTR//CDS//exon       24284625//25456834//24981863//27371828//22608085 chr1:228584695-228584696(-) m6A 3'UTR//CDS//exon       24284625//24209618//25456834//24981863//27371828//22608085 chr1:228584793-228584794(-) m6A CDS//intron       24284625//27371828 chr1:228589783-228589784(-) m6A CDS//intron       27371828 chr1:228590967-228590968(-) m6A 5'UTR//intron       27773535 chr1:228591023-228591024(-) m6A 5'UTR//intron       27773535 chr1:228591031-228591032(-) m6A 5'UTR//intron       27773535 chr1:228591382-228591383(-) m6A 5'UTR//intron       27773535 chr1:228591392-228591393(-) m6A 5'UTR//intron       27773535 chr1:228592481-228592482(-) m6A 5'UTR//intron       24981863 chr1:228592508-228592509(-) m6A 5'UTR//intron       24981863 chr1:228593466-228593467(-) m6A 5'UTR//intron       - chr1:228593861-228593862(-) m6A CDS       - chr1:228594071-228594072(-) m6A CDS       - chr1:228594293-228594294(-) m6A 5'UTR       24209618//24981863//27773536//22575960 chr1:228594447-228594448(-) m6A 5'UTR       27773536

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	TRIM11	Chromatin K562 cells     - Cytosol Human myelogenous leukemia cell line (K-562)     21613539 Cytosol K562 cells     - Exosome Blood     - Nucleolus K562 cells     - Nucleoplasm K562 cells     - Nucleus Colon cancer cells     24393600

Interaction Network (The top 100 interactions):

Interactor1: hbv-miR-B8-3p
Interactor2: TRIM11

Evidence Support:

Prediction-Evidence	miRanda//PITA//RNAHybrid//Targetscan
Support Database	VmiReg