Detail Information

Basic Information:


  VIRBase ID:  

VHID00563579

  Virus:  

Macacine alphaherpesvirus 1 (CeHV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2381

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hbv-miR-B8-3p:           KDM7A:      

      *It may take a few minutes to display results.

Interactor Information:


Interactor1 Interactor2
Symbol hbv-miR-B8-3p KDM7A
miRBase
Accession/Entrez ID		 MIMAT0031768 80853
Organism Macacine alphaherpesvirus 1 (CeHV-1) Homo sapiens
Category miRNA mRNA
Alias - JHDM1D

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR KDM7A
chr7:139794161(-) A-I      intronic
chr7:139866413(-) A-I      intronic
chr7:139866268(-) A-I      intronic
chr7:139866411(-) A-I      intronic
chr7:139863328(-) A-I      intronic
chr7:139866410(-) A-I      intronic
chr7:139861410(-) A-I      intronic
chr7:139857712(-) A-I      intronic
chr7:139838007(-) A-I      intronic
chr7:139835273(-) A-I      intronic
chr7:139830345(-) A-I      intronic
chr7:139830339(-) A-I      intronic
chr7:139795522(-) A-I      intronic
chr7:139830338(-) A-I      intronic
chr7:139830305(-) A-I      intronic
chr7:139866362(-) A-I      intronic
chr7:139794821(-) A-I      intronic
chr7:139794222(-) A-I      intronic
chr7:139823703(-) A-I      intronic
chr7:139823832(-) A-I      intronic
chr7:139794271(-) A-I      intronic
chr7:139866317(-) A-I      intronic
chr7:139794715(-) A-I      intronic
chr7:139794759(-) A-I      intronic
chr7:139794769(-) A-I      intronic
chr7:139794776(-) A-I      intronic
chr7:139794785(-) A-I      intronic
chr7:139794786(-) A-I      intronic
chr7:139794812(-) A-I      intronic
chr7:139794815(-) A-I      intronic
chr7:139794252(-) A-I      intronic
chr7:139794816(-) A-I      intronic
chr7:139866319(-) A-I      intronic
chr7:139866320(-) A-I      intronic
chr7:139818344(-) A-I      intronic
chr7:139866365(-) A-I      intronic
chr7:139818343(-) A-I      intronic
chr7:139869422(-) A-I      intronic
chr7:139869470(-) A-I      intronic
chr7:139874577(-) A-I      intronic
chr7:139794248(-) A-I      intronic
chr7:139794236(-) A-I      intronic
chr7:139873815(-) A-I      intronic
chr7:139873801(-) A-I      intronic
chr7:139794867(-) A-I      intronic
chr7:139873798(-) A-I      intronic
chr7:139871238(-) A-I      intronic
chr7:139870849(-) A-I      intronic
chr7:139869529(-) A-I      intronic
chr7:139794157(-) A-I      intronic
chr7:139869463(-) A-I      intronic
chr7:139869458(-) A-I      intronic
chr7:139869437(-) A-I      intronic
chr7:139794139(-) A-I      intronic
chr7:139794845(-) A-I      intronic
chr7:139794885(-) A-I      intronic
chr7:139794193(-) A-I      intronic
chr7:139862927(-) A-I      intronic
chr7:139813649(-) A-I      intronic
chr7:139861483(-) A-I      intronic
chr7:139862007(-) A-I      intronic
chr7:139795484(-) A-I      NonSyn:Asp->Gly
chr7:139861970(-) A-I      intronic
chr7:139794297(-) A-I      intronic
chr7:139794912(-) A-I      intronic
chr7:139862052(-) A-I      intronic
chr7:139823634(-) A-I      intronic
chr7:139795506(-) A-I      NonSyn:Arg->Gly
chr7:139827049(-) A-I      intronic
chr7:139823682(-) A-I      intronic
chr7:139794183(-) A-I      intronic
chr7:139794242(-) A-I      intronic
chr7:139794744(-) A-I      intronic
chr7:139866322(-) A-I      intronic
chr7:139794048(-) A-I      intronic
chr7:139795596(-) A-I      intronic
chr7:139866261(-) A-I      intronic
chr7:139795557(-) A-I      intronic
chr7:139794826(-) A-I      intronic
chr7:139874489(-) A-I      intronic
chr7:139868121(-) A-I      intronic
chr7:139794113(-) A-I      intronic
chr7:139795592(-) A-I      intronic

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase KDM7A
chr7:139790101-139790102(-) m6A 3'UTR       27773535
chr7:139790126-139790127(-) m6A 3'UTR       27773535
chr7:139790146-139790147(-) m6A 3'UTR       27773535
chr7:139790342-139790343(-) m6A 3'UTR       27773535
chr7:139790376-139790377(-) m6A 3'UTR       27773535
chr7:139790656-139790657(-) m6A 3'UTR       24284625//25456834//24981863//27773535//27371828//22608085
chr7:139790663-139790664(-) m6A 3'UTR       24284625//25456834//24981863//27773535//27371828//22608085
chr7:139790676-139790677(-) m6A 3'UTR       24284625//25456834//24981863//27773535//27371828//22608085
chr7:139790708-139790709(-) m6A 3'UTR//exon       24284625//25456834//24981863//27773535//27371828//22608085
chr7:139790761-139790762(-) m6A 3'UTR//exon       24284625//25456834//24981863//27773535//27371828//22608085
chr7:139790770-139790771(-) m6A 3'UTR//exon       24284625//25456834//24981863//27773535//27371828//22608085
chr7:139790784-139790785(-) m6A 3'UTR//exon       24284625//25456834//24981863//27773535//27371828//22608085
chr7:139790857-139790858(-) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//27773535//27371828//22608085
chr7:139790924-139790925(-) m6A 3'UTR//CDS//exon       24284625//25456834//24981863//27773535//27371828//22608085
chr7:139790953-139790954(-) m6A 3'UTR//CDS//exon       24284625//25456834//24981863//27773535//27371828//22608085
chr7:139791646-139791647(-) m6A 3'UTR//CDS//exon       24284625//24209618//24981863//27773535//27371828//22608085
chr7:139791681-139791682(-) m6A 3'UTR//CDS//exon       24284625//24209618//24981863//27773535//27371828//22608085
chr7:139791746-139791747(-) m6A 3'UTR//CDS//exon       24981863//27773535//22608085
chr7:139791794-139791795(-) m6A 3'UTR//CDS//exon       24981863//27773535//22608085
chr7:139791916-139791917(-) m6A exon//intron       27773535
chr7:139797416-139797417(-) m6A CDS       24981863
chr7:139798688-139798689(-) m6A CDS       24981863//27773535
chr7:139798706-139798707(-) m6A CDS       24981863//27773535
chr7:139798759-139798760(-) m6A CDS       24981863//27773535
chr7:139799784-139799785(-) m6A CDS       27773535
chr7:139838923-139838924(-) Y CDS       26075521

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate KDM7A
Chromatin K562 cells     -
Cytosol HCC cell line (HepG2)     -
Exosome Blood     -
Nucleoplasm K562 cells     -
Nucleus Colon cancer cells     24393600
Nucleus HCC cell line (HepG2)     -

Interaction Network (The top 100 interactions):


Interactor1: hbv-miR-B8-3p
Interactor2: KDM7A

Evidence Support:


Prediction-Evidence miRanda//PITA//Targetscan
Support Database VmiReg

Starting a new search, please wait ...