Basic Information:

  VIRBase ID:  

VHID00563500

  Virus:  

Macacine alphaherpesvirus 1 (CeHV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hbv-miR-B8-3p:  MIMAT0031768          BORA:  NM_001286747     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hbv-miR-B8-3p	BORA
miRBase Accession/Entrez ID	MIMAT0031768	79866
Organism	Macacine alphaherpesvirus 1 (CeHV-1)	Homo sapiens
Category	miRNA	mRNA
Alias	-	C13orf34

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	BORA	chr13:73305018(+) A-I      intronic chr13:73306557(+) A-I      intronic chr13:73306631(+) A-I      intronic chr13:73309865(+) A-I      intronic chr13:73309812(+) A-I      intronic chr13:73304974(+) A-I      intronic chr13:73306775(+) A-I      intronic chr13:73309957(+) A-I      intronic chr13:73306551(+) A-I      intronic chr13:73304979(+) A-I      intronic chr13:73306558(+) A-I      intronic chr13:73304142(+) A-I      intronic chr13:73310008(+) A-I      intronic chr13:73309841(+) A-I      intronic chr13:73310009(+) A-I      intronic chr13:73309848(+) A-I      intronic chr13:73306588(+) A-I      intronic chr13:73304975(+) A-I      intronic chr13:73310021(+) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	BORA	chr13:73304975(+) A-I intron -    22327324 chr13:73304975(+) A-G intron -    22484847 chr13:73306631(+) A-G intron -    22484847

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	BORA	chr13:73303120-73303121(+) m6A 5'UTR//CDS//exon//intron       24284625 chr13:73320682-73320683(+) m6A CDS       24284625//24981863//22608085 chr13:73320768-73320769(+) m6A CDS       24284625//24209618//24981863//22575960//22608085 chr13:73320802-73320803(+) m6A CDS       24284625//24209618//24981863//22575960//22608085 chr13:73320835-73320836(+) m6A CDS       24284625//24981863//22575960//22608085 chr13:73321052-73321053(+) m6A CDS       24284625//24209618//25456834//24981863//22575960//22608085 chr13:73321099-73321100(+) m6A CDS       24284625//24209618//24981863//27773535//22575960//22608085 chr13:73321181-73321182(+) m6A CDS       24284625//24209618//24981863//22575960//22608085 chr13:73327917-73327918(+) m6A CDS       22608085 chr13:73329292-73329293(+) m6A CDS       22608085 chr13:73329321-73329322(+) m6A CDS       24284625//24981863//22608085 chr13:73329376-73329377(+) m6A 3'UTR       24284625//24981863//22575960//22608085 chr13:73329511-73329512(+) m6A 3'UTR       24284625//27773535//22608085 chr13:73329531-73329532(+) m6A 3'UTR       24284625//27773535//22608085 chr13:73329654-73329655(+) m6A 3'UTR       27773535 chr13:73329702-73329703(+) m6A 3'UTR       27773535 chr13:73329711-73329712(+) m6A 3'UTR       27773535 chr13:73329722-73329723(+) m6A 3'UTR       27773535 chr13:73330036-73330037(+) m6A 3'UTR       27773535 chr13:73330092-73330093(+) m6A 3'UTR       27773535 chr13:73330199-73330200(+) m6A 3'UTR       24981863//27773535

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	BORA	Chromatin K562 cells     - Cytosol Human myelogenous leukemia cell line (K-562)     21613539 Exosome Blood     - Nucleoplasm K562 cells     - Nucleus K562 cells     -

Interaction Network (The top 100 interactions):

Interactor1: hbv-miR-B8-3p
Interactor2: BORA

Evidence Support:

Prediction-Evidence	miRanda//RNAHybrid
Support Database	VmiReg