Detail Information

Basic Information:


  VIRBase ID:  

VHID00563483

  Virus:  

Macacine alphaherpesvirus 1 (CeHV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hbv-miR-B8-3p:           CLMN:      

      *It may take a few minutes to display results.

Interactor Information:


Interactor1 Interactor2
Symbol hbv-miR-B8-3p CLMN
miRBase
Accession/Entrez ID		 MIMAT0031768 79789
Organism Macacine alphaherpesvirus 1 (CeHV-1) Homo sapiens
Category miRNA mRNA
Alias - -

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR CLMN
chr14:95659656(-) A-I      intronic
chr14:95651179(-) A-I      3'UTR
chr14:95651393(-) A-I      3'UTR
chr14:95653034(-) A-I      3'UTR
chr14:95653187(-) A-I      3'UTR
chr14:95726667(-) A-I      intronic
chr14:95726620(-) A-I      intronic
chr14:95731365(-) A-I      intronic
chr14:95735243(-) A-I      intronic
chr14:95741159(-) A-I      intronic
chr14:95741144(-) A-I      intronic
chr14:95741123(-) A-I      intronic
chr14:95741073(-) A-I      intronic
chr14:95744142(-) A-I      intronic
chr14:95744134(-) A-I      intronic
chr14:95735405(-) A-I      intronic
chr14:95735360(-) A-I      intronic
chr14:95744078(-) A-I      intronic
chr14:95741074(-) A-I      intronic
chr14:95730645(-) A-I      intronic
chr14:95741061(-) A-I      intronic
chr14:95730565(-) A-I      intronic
chr14:95726522(-) A-I      intronic
chr14:95708756(-) A-I      intronic
chr14:95708734(-) A-I      intronic
chr14:95708733(-) A-I      intronic
chr14:95708686(-) A-I      intronic
chr14:95708591(-) A-I      intronic
chr14:95744177(-) A-I      intronic
chr14:95730554(-) A-I      intronic
chr14:95744168(-) A-I      intronic
chr14:95730493(-) A-I      intronic
chr14:95745953(-) A-I      intronic
chr14:95745947(-) A-I      intronic
chr14:95726695(-) A-I      intronic
chr14:95741124(-) A-I      intronic
chr14:95663572(-) A-I      intronic
chr14:95730604(-) A-I      intronic
chr14:95651279(-) A-I      3'UTR
chr14:95653013(-) A-I      3'UTR
chr14:95653117(-) A-I      3'UTR
chr14:95651444(-) A-I      3'UTR
chr14:95651254(-) A-I      3'UTR
chr14:95651201(-) A-I      3'UTR
chr14:95653141(-) A-I      3'UTR
chr14:95651407(-) A-I      3'UTR
chr14:95651200(-) A-I      3'UTR
chr14:95653177(-) A-I      3'UTR
chr14:95651441(-) A-I      3'UTR
chr14:95653144(-) A-I      3'UTR
chr14:95651375(-) A-I      3'UTR
chr14:95652985(-) A-I      3'UTR
chr14:95651187(-) A-I      3'UTR
chr14:95652970(-) A-I      3'UTR
chr14:95651356(-) A-I      3'UTR
chr14:95653173(-) A-I      3'UTR
chr14:95651437(-) A-I      3'UTR
chr14:95664524(-) A-I      intronic
chr14:95731339(-) A-I      intronic
chr14:95744195(-) A-I      intronic
chr14:95744125(-) A-I      intronic
chr14:95741167(-) A-I      intronic
chr14:95729189(-) A-I      intronic
chr14:95668725(-) A-I      intronic
chr14:95731534(-) A-I      intronic
chr14:95710542(-) A-I      intronic
chr14:95727914(-) A-I      intronic
chr14:95668767(-) A-I      intronic
chr14:95730541(-) A-I      intronic
chr14:95744129(-) A-I      intronic
chr14:95664448(-) A-I      intronic
chr14:95735289(-) A-I      intronic
chr14:95744103(-) A-I      intronic
chr14:95729194(-) A-I      intronic
chr14:95667163(-) A-I      intronic
chr14:95664525(-) A-I      intronic
chr14:95741200(-) A-I      intronic
chr14:95676509(-) A-I      intronic
chr14:95726679(-) A-I      intronic
chr14:95667976(-) A-I      intronic
chr14:95742164(-) A-I      intronic
chr14:95727925(-) A-I      intronic
chr14:95744032(-) A-I      intronic
chr14:95667013(-) A-I      intronic
chr14:95741136(-) A-I      intronic
chr14:95742208(-) A-I      intronic
chr14:95664454(-) A-I      intronic
chr14:95727459(-) A-I      intronic
chr14:95726589(-) A-I      intronic
chr14:95727862(-) A-I      intronic
chr14:95664743(-) A-I      intronic
chr14:95741153(-) A-I      intronic
chr14:95729042(-) A-I      intronic
chr14:95731515(-) A-I      intronic
chr14:95729147(-) A-I      intronic
chr14:95741284(-) A-I      intronic
chr14:95667966(-) A-I      intronic
chr14:95735133(-) A-I      intronic
chr14:95735410(-) A-I      intronic
chr14:95668004(-) A-I      intronic
chr14:95731333(-) A-I      intronic
chr14:95664485(-) A-I      intronic
chr14:95745998(-) A-I      intronic
chr14:95741207(-) A-I      intronic
chr14:95653171(-) A-I      3'UTR
chr14:95651381(-) A-I      3'UTR
chr14:95651228(-) A-I      3'UTR
chr14:95653026(-) A-I      3'UTR
chr14:95651361(-) A-I      3'UTR
chr14:95652944(-) A-I      3'UTR
chr14:95652954(-) A-I      3'UTR
chr14:95653170(-) A-I      3'UTR
chr14:95651826(-) A-I      3'UTR
chr14:95652980(-) A-I      3'UTR
chr14:95653215(-) A-I      3'UTR
chr14:95651241(-) A-I      3'UTR
chr14:95653042(-) A-I      3'UTR
chr14:95651324(-) A-I      3'UTR
chr14:95651434(-) A-I      3'UTR
chr14:95653030(-) A-I      3'UTR
chr14:95651386(-) A-I      3'UTR
chr14:95653125(-) A-I      3'UTR
chr14:95653130(-) A-I      3'UTR
chr14:95651331(-) A-I      3'UTR
chr14:95653154(-) A-I      3'UTR
chr14:95651335(-) A-I      3'UTR
chr14:95651183(-) A-I      3'UTR
chr14:95653148(-) A-I      3'UTR
chr14:95653121(-) A-I      3'UTR
chr14:95651334(-) A-I      3'UTR
chr14:95651229(-) A-I      3'UTR
chr14:95653048(-) A-I      3'UTR
Resource Symbol Editing Position Change SeqReg exReg PMID
DARNED CLMN
chr14:95651228(-) A-I exon 3'UTR    15342557   //15258596
chr14:95651331(-) A-I exon 3'UTR    15342557   //15258596
chr14:95651335(-) A-I exon 3'UTR    15342557   //15258596
chr14:95651589(-) A-I exon 3'UTR    15342557
chr14:95652125(-) A-I exon 3'UTR    15342557
chr14:95652970(-) A-I exon 3'UTR    15342557   //15258596   //22327324
chr14:95653026(-) A-I exon 3'UTR    15342557   //15258596   //22327324
chr14:95653048(-) A-I exon 3'UTR    15342557   //15258596
chr14:95710542(-) A-I intron -    15545495
chr14:95652980(-) A-I exon 3'UTR    22327324
chr14:95653030(-) A-I exon 3'UTR    22327324
chr14:95653117(-) A-I exon 3'UTR    22327324
chr14:95667013(-) A-I intron -    21960545
chr14:95667138(-) A-I intron -    21960545
chr14:95667162(-) A-I intron -    21960545
chr14:95667163(-) A-I intron -    21960545
chr14:95668725(-) A-I intron -    21960545
chr14:95668726(-) A-I intron -    21960545
chr14:95668748(-) A-I intron -    21960545
chr14:95668756(-) A-I intron -    21960545
chr14:95668775(-) A-I intron -    21960545
chr14:95668767(-) A-G intron -    22484847
chr14:95727914(-) A-G intron -    22484847
chr14:95651229(-) A-G exon 3'UTR    22484847
chr14:95651324(-) A-G exon 3'UTR    22484847
chr14:95651331(-) A-G exon 3'UTR    22484847
chr14:95651334(-) A-G exon 3'UTR    22484847
chr14:95651335(-) A-G exon 3'UTR    22484847
chr14:95651381(-) A-G exon 3'UTR    22484847
chr14:95652970(-) A-G exon 3'UTR    22484847
chr14:95652980(-) A-G exon 3'UTR    22484847
chr14:95653026(-) A-G exon 3'UTR    22484847
chr14:95653030(-) A-G exon 3'UTR    22484847
chr14:95653048(-) A-G exon 3'UTR    22484847
chr14:95653117(-) A-G exon 3'UTR    22484847
chr14:95653121(-) A-G exon 3'UTR    22484847
chr14:95653125(-) A-G exon 3'UTR    22484847
chr14:95653215(-) A-G exon 3'UTR    22484847

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase CLMN
chr14:95651502-95651503(-) m6A 3'UTR       24981863
chr14:95651535-95651536(-) m6A 3'UTR       24981863
chr14:95651546-95651547(-) m6A 3'UTR       24981863
chr14:95657779-95657780(-) m6A 3'UTR       24981863
chr14:95657785-95657786(-) m6A 3'UTR       24981863
chr14:95657797-95657798(-) m6A 3'UTR       24981863
chr14:95657807-95657808(-) m6A 3'UTR       24981863
chr14:95657869-95657870(-) m6A 3'UTR//exon       24981863
chr14:95657874-95657875(-) m6A 3'UTR//exon       24981863
chr14:95660541-95660542(-) m6A exon//intron       27371828
chr14:95660573-95660574(-) m6A 5'UTR//exon//intron       27371828
chr14:95660607-95660608(-) m6A 5'UTR//exon//intron       -
chr14:95662927-95662928(-) m6A CDS//exon       24981863
chr14:95662935-95662936(-) m6A CDS//exon       24981863
chr14:95662996-95662997(-) m6A CDS//exon       24981863//28052920
chr14:95663005-95663006(-) m6A CDS//exon       24981863//28052920
chr14:95663014-95663015(-) m6A CDS//exon       24981863//28052920
chr14:95669184-95669185(-) m6A CDS//exon       24284625//24981863//28052920
chr14:95669206-95669207(-) m6A CDS//exon       24284625//24981863//28052920//27371828
chr14:95669223-95669224(-) m6A CDS//exon       24284625//24981863//28052920//27371828//27773536
chr14:95669249-95669250(-) m6A CDS//exon       24284625//24981863//28052920//27371828//27773536
chr14:95669382-95669383(-) m6A CDS//exon       24284625//25456834//24981863//28052920//27371828//22608085
chr14:95669388-95669389(-) m6A CDS//exon       24284625//25456834//24981863//28052920//27371828//22608085
chr14:95669448-95669449(-) m6A CDS//exon       24284625//25456834//24981863//27371828//22608085
chr14:95669740-95669741(-) m6A CDS//exon       24284625//24981863//28052920//27371828//22608085
chr14:95669784-95669785(-) m6A CDS//exon       24284625//24981863//28052920//27371828//22608085
chr14:95669795-95669796(-) m6A CDS//exon       24284625//24981863//28052920//27371828//22608085
chr14:95669805-95669806(-) m6A CDS//exon       24284625//24981863//28052920//27371828//22608085
chr14:95669873-95669874(-) m6A CDS//exon       24284625//24981863//28052920//27371828//22608085
chr14:95669915-95669916(-) m6A CDS//exon       24284625//24981863//22608085
chr14:95669920-95669921(-) m6A CDS//exon       24284625//24981863//22608085
chr14:95670024-95670025(-) m6A CDS//exon       24284625//24981863//22608085
chr14:95670186-95670187(-) m6A CDS//exon       24284625//24981863//28052920//27371828//22608085
chr14:95670260-95670261(-) m6A CDS//exon       24284625//25456834//24981863//28052920//27371828//22608085
chr14:95670266-95670267(-) m6A CDS//exon       24284625//25456834//24981863//28052920//27371828//22608085
chr14:95670302-95670303(-) m6A CDS//exon       24284625//25456834//24981863//28052920//27371828//22608085
chr14:95670363-95670364(-) m6A CDS//exon       24284625//24981863//28052920//27371828//22608085
chr14:95670412-95670413(-) m6A CDS//exon       24284625//24981863//28052920//22608085
chr14:95670564-95670565(-) m6A CDS//exon       24284625
chr14:95677195-95677196(-) m6A CDS       24284625//24981863//28052920
chr14:95679609-95679610(-) m6A CDS       24284625//24981863
chr14:95679666-95679667(-) m6A CDS       24284625
chr14:95679672-95679673(-) m6A CDS       24284625
chr14:95679714-95679715(-) m6A CDS       24284625

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate CLMN
Exosome Blood     -
Nucleus HCC cell line (HepG2)     -

Interaction Network (The top 100 interactions):


Interactor1: hbv-miR-B8-3p
Interactor2: CLMN

Evidence Support:


Prediction-Evidence miRanda//Targetscan
Support Database VmiReg

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