Basic Information:

  VIRBase ID:  

VHID00563359

  Virus:  

Macacine alphaherpesvirus 1 (CeHV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2455

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hbv-miR-B8-3p:  MIMAT0031768          GORASP1:  NM_001278789     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hbv-miR-B8-3p	GORASP1
miRBase Accession/Entrez ID	MIMAT0031768	64689
Organism	Macacine alphaherpesvirus 1 (CeHV-1)	Homo sapiens
Category	miRNA	mRNA
Alias	-	GOLPH5//GRASP65//P65

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	GORASP1	chr3:39138401-39138402(-) m6A 3'UTR//exon       24284625 chr3:39138417-39138418(-) m6A 3'UTR//exon       24284625 chr3:39139077-39139078(-) m6A 3'UTR//exon       27773535 chr3:39139083-39139084(-) m6A 3'UTR//exon       27773535 chr3:39139120-39139121(-) m6A 3'UTR//exon       27773535 chr3:39139134-39139135(-) m6A 3'UTR//exon       27773535 chr3:39139160-39139161(-) m6A 3'UTR//exon       27773535 chr3:39139176-39139177(-) m6A 3'UTR//exon       27773535 chr3:39139619-39139620(-) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085 chr3:39139757-39139758(-) m6A 3'UTR//CDS//exon       24284625//24209618//25456834//24981863//27773535//27371828//27773536//22575960//22608085 chr3:39139807-39139808(-) m6A 3'UTR//CDS//exon       24284625//24209618//25456834//24981863//27773535//27371828//27773536//22575960//22608085 chr3:39139907-39139908(-) m6A 3'UTR//CDS//exon       24284625//25456834//27773535//27371828//27773536//22575960//22608085 chr3:39139934-39139935(-) m6A 3'UTR//CDS//exon       24284625//27773535//27371828//27773536//22575960//22608085 chr3:39140266-39140267(-) m6A 3'UTR//CDS//exon       27773535//27371828 chr3:39140304-39140305(-) m6A 3'UTR//CDS//exon       24284625//27773535 chr3:39140350-39140351(-) m6A 3'UTR//CDS//exon//intron       24284625//27773535 chr3:39140403-39140404(-) m6A exon//intron       24284625//27773535 chr3:39140888-39140889(-) m6A 3'UTR//CDS//exon       27773535 chr3:39140907-39140908(-) m6A 3'UTR//CDS//exon       27773535 chr3:39141824-39141825(-) m6A 3'UTR//CDS//exon//intron       27773535 chr3:39141841-39141842(-) m6A 3'UTR//CDS//exon//intron       27773535 chr3:39141855-39141856(-) m6A 3'UTR//CDS//exon//intron       27773535 chr3:39144370-39144371(-) m6A 5'UTR//CDS//exon//intron       27773536 chr3:39144435-39144436(-) m6A exon//intron       27773536 chr3:39145033-39145034(-) m6A 5'UTR//CDS//exon//intron       27371828//27773536 chr3:39145156-39145157(-) m6A exon//intron       - chr3:39145170-39145171(-) m6A exon//intron       - chr3:39148791-39148792(-) m6A 5'UTR//intron       27773536 chr3:39149058-39149059(-) m6A 5'UTR//exon       25456834//24981863//27371828//27773536 chr3:39149063-39149064(-) m6A 5'UTR//exon       25456834//24981863//27371828//27773536 chr3:39149157-39149158(-) m6A 5'UTR       24981863

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	GORASP1	Chromatin K562 cells     - Cytosol Human myelogenous leukemia cell line (K-562)     21613539 Cytosol HeLa-S3 cells     - Exosome Blood     - Nucleolus K562 cells     - Nucleoplasm K562 cells     - Ribosome Colon cancer cells     24393600

Interaction Network (The top 100 interactions):

Interactor1: hbv-miR-B8-3p
Interactor2: GORASP1

Evidence Support:

Prediction-Evidence	miRanda//PITA//RNAHybrid//Targetscan
Support Database	VmiReg