Detail Information

Basic Information:


  VIRBase ID:  

VHID00563351

  Virus:  

Macacine alphaherpesvirus 1 (CeHV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hbv-miR-B8-3p:           DCLRE1C:      

      *It may take a few minutes to display results.

Interactor Information:


Interactor1 Interactor2
Symbol hbv-miR-B8-3p DCLRE1C
miRBase
Accession/Entrez ID		 MIMAT0031768 64421
Organism Macacine alphaherpesvirus 1 (CeHV-1) Homo sapiens
Category miRNA mRNA
Alias - A-SCID//DCLREC1C//RS-SCID//SCIDA//SNM1C

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR DCLRE1C
chr10:14948909(-) A-I      3'UTR
chr10:14948949(-) A-I      3'UTR
chr10:14949969(-) A-I      3'UTR
chr10:14949993(-) A-I      3'UTR
chr10:14949571(-) A-I      3'UTR
chr10:14977001(-) A-I      intronic
chr10:14986802(-) A-I      intronic
chr10:14986822(-) A-I      intronic
chr10:14987754(-) A-I      intronic
chr10:14986332(-) A-I      intronic
chr10:14952494(-) A-I      intronic
chr10:14988136(-) A-I      intronic
chr10:14973475(-) A-I      intronic
chr10:14972740(-) A-I      intronic
chr10:14985116(-) A-I      intronic
chr10:14989008(-) A-I      intronic
chr10:14974141(-) A-I      intronic
chr10:14977344(-) A-I      intronic
chr10:14989043(-) A-I      intronic
chr10:14976993(-) A-I      intronic
chr10:14972648(-) A-I      intronic
chr10:14973435(-) A-I      intronic
chr10:14989067(-) A-I      intronic
chr10:14962869(-) A-I      intronic
chr10:14972627(-) A-I      intronic
chr10:14972669(-) A-I      intronic
chr10:14971281(-) A-I      intronic
chr10:14979529(-) A-I      intronic
chr10:14972529(-) A-I      intronic
chr10:14974393(-) A-I      intronic
chr10:14973346(-) A-I      intronic
chr10:14972499(-) A-I      intronic
chr10:14976992(-) A-I      intronic
chr10:14972704(-) A-I      intronic
chr10:14979476(-) A-I      intronic
chr10:14970890(-) A-I      intronic
chr10:14979771(-) A-I      intronic
chr10:14972705(-) A-I      intronic
chr10:14979471(-) A-I      intronic
chr10:14972208(-) A-I      intronic
chr10:14972570(-) A-I      intronic
chr10:14989181(-) A-I      intronic
chr10:14959605(-) A-I      intronic
chr10:14959640(-) A-I      intronic
chr10:14979510(-) A-I      intronic
chr10:14959748(-) A-I      intronic
chr10:14988834(-) A-I      intronic
chr10:14962762(-) A-I      intronic
chr10:14966641(-) A-I      intronic
chr10:14979746(-) A-I      intronic
chr10:14972231(-) A-I      intronic
chr10:14969209(-) A-I      intronic
chr10:14976986(-) A-I      intronic
chr10:14969303(-) A-I      intronic
chr10:14979718(-) A-I      intronic
chr10:14972467(-) A-I      intronic
chr10:14969332(-) A-I      intronic
chr10:14972560(-) A-I      intronic
chr10:14985606(-) A-I      intronic
chr10:14979446(-) A-I      intronic
chr10:14970919(-) A-I      intronic
chr10:14971006(-) A-I      intronic
chr10:14971030(-) A-I      intronic
chr10:14971038(-) A-I      intronic
chr10:14972690(-) A-I      intronic
chr10:14972396(-) A-I      intronic
chr10:14979633(-) A-I      intronic
chr10:14974392(-) A-I      intronic
chr10:14979696(-) A-I      intronic
chr10:14979889(-) A-I      intronic
chr10:14985043(-) A-I      intronic
chr10:14985741(-) A-I      intronic
chr10:14985742(-) A-I      intronic
chr10:14979419(-) A-I      intronic
chr10:14984958(-) A-I      intronic
chr10:14973553(-) A-I      intronic
chr10:14986415(-) A-I      intronic
chr10:14986949(-) A-I      intronic
chr10:14970959(-) A-I      intronic
chr10:14987695(-) A-I      intronic
chr10:14972462(-) A-I      intronic
chr10:14972184(-) A-I      intronic
chr10:14973500(-) A-I      intronic
chr10:14973494(-) A-I      intronic
chr10:14948960(-) A-I      3'UTR
chr10:14949957(-) A-I      3'UTR
chr10:14949122(-) A-I      3'UTR
chr10:14949144(-) A-I      3'UTR
chr10:14949006(-) A-I      3'UTR
chr10:14949853(-) A-I      3'UTR
chr10:14949926(-) A-I      3'UTR
chr10:14948996(-) A-I      3'UTR
chr10:14949134(-) A-I      3'UTR
chr10:14948917(-) A-I      3'UTR
chr10:14949982(-) A-I      3'UTR
chr10:14950122(-) A-I      3'UTR
chr10:14948913(-) A-I      3'UTR
chr10:14949958(-) A-I      3'UTR
chr10:14949855(-) A-I      3'UTR
chr10:14950279(-) A-I      3'UTR
chr10:14949972(-) A-I      3'UTR
chr10:14948891(-) A-I      3'UTR
chr10:14949089(-) A-I      3'UTR
chr10:14989170(-) A-I      intronic
chr10:14974584(-) A-I      intronic
chr10:14973440(-) A-I      intronic
chr10:14979562(-) A-I      intronic
chr10:14979442(-) A-I      intronic
chr10:14972659(-) A-I      intronic
chr10:14977382(-) A-I      intronic
chr10:14970958(-) A-I      intronic
chr10:14946182(-) A-I      intronic
chr10:14989149(-) A-I      intronic
chr10:14987889(-) A-I      intronic
chr10:14959657(-) A-I      intronic
chr10:14979382(-) A-I      intronic
chr10:14972500(-) A-I      intronic
chr10:14986770(-) A-I      intronic
chr10:14973377(-) A-I      intronic
chr10:14972628(-) A-I      intronic
chr10:14986398(-) A-I      intronic
chr10:14971584(-) A-I      intronic
chr10:14977026(-) A-I      intronic
chr10:14971052(-) A-I      intronic
chr10:14989103(-) A-I      intronic
chr10:14977343(-) A-I      intronic
chr10:14989946(-) A-I      intronic
chr10:14976997(-) A-I      intronic
chr10:14979377(-) A-I      intronic
chr10:14979556(-) A-I      intronic
chr10:14986911(-) A-I      intronic
chr10:14985086(-) A-I      intronic
chr10:14989089(-) A-I      intronic
chr10:14977341(-) A-I      intronic
chr10:14979810(-) A-I      intronic
chr10:14988186(-) A-I      intronic
chr10:14989095(-) A-I      intronic
chr10:14976989(-) A-I      intronic
chr10:14959630(-) A-I      intronic
chr10:14988183(-) A-I      intronic
chr10:14989055(-) A-I      intronic
chr10:14977316(-) A-I      intronic
chr10:14979509(-) A-I      intronic
chr10:14974394(-) A-I      intronic
chr10:14985749(-) A-I      intronic
chr10:14976998(-) A-I      intronic
chr10:14972534(-) A-I      intronic
chr10:14989066(-) A-I      intronic
chr10:14979698(-) A-I      intronic
chr10:14970946(-) A-I      intronic
chr10:14973445(-) A-I      intronic
chr10:14986416(-) A-I      intronic
chr10:14988816(-) A-I      intronic
chr10:14986853(-) A-I      intronic
chr10:14971021(-) A-I      intronic
chr10:14959566(-) A-I      intronic
chr10:14959739(-) A-I      intronic
chr10:14988288(-) A-I      intronic
chr10:14976995(-) A-I      intronic
chr10:14969302(-) A-I      intronic
chr10:14946121(-) A-I      intronic
chr10:14971029(-) A-I      intronic
chr10:14988124(-) A-I      intronic
chr10:14985110(-) A-I      intronic
chr10:14979639(-) A-I      intronic
chr10:14979724(-) A-I      intronic
chr10:14979824(-) A-I      intronic
chr10:14979370(-) A-I      intronic
chr10:14985787(-) A-I      intronic
chr10:14979742(-) A-I      intronic
chr10:14972691(-) A-I      intronic
chr10:14970922(-) A-I      intronic
chr10:14972383(-) A-I      intronic
chr10:14972378(-) A-I      intronic
chr10:14972524(-) A-I      intronic
chr10:14989111(-) A-I      intronic
chr10:14943779(-) A-I      intronic
chr10:14979811(-) A-I      intronic
chr10:14985016(-) A-I      intronic
chr10:14950273(-) A-I      3'UTR
chr10:14948890(-) A-I      3'UTR
chr10:14950117(-) A-I      3'UTR
chr10:14949121(-) A-I      3'UTR
chr10:14949989(-) A-I      3'UTR
chr10:14986851(-) A-I      intronic
chr10:14950077(-) A-I      3'UTR
chr10:14948989(-) A-I      3'UTR
chr10:14950021(-) A-I      3'UTR
chr10:14948950(-) A-I      3'UTR
chr10:14986870(-) A-I      intronic
chr10:14949135(-) A-I      3'UTR
chr10:14949928(-) A-I      3'UTR
chr10:14973518(-) A-I      intronic
chr10:14948965(-) A-I      3'UTR
chr10:14949999(-) A-I      3'UTR
chr10:14959733(-) A-I      intronic
chr10:14949977(-) A-I      3'UTR
chr10:14949998(-) A-I      3'UTR
chr10:14949037(-) A-I      3'UTR
chr10:14988741(-) A-I      intronic
chr10:14949985(-) A-I      3'UTR
chr10:14949138(-) A-I      3'UTR
chr10:14949976(-) A-I      3'UTR
Resource Symbol Editing Position Change SeqReg exReg PMID
DARNED DCLRE1C
chr10:14988124(-) A-I intron -    22327324
chr10:14972524(-) A-I intron -    22028664
chr10:14972560(-) A-I intron -    22028664
chr10:14972570(-) A-I intron -    22028664
chr10:14972596(-) A-I intron -    22028664
chr10:14972627(-) A-I intron -    22028664
chr10:14972628(-) A-I intron -    22028664
chr10:14972648(-) A-I intron -    22028664
chr10:14972659(-) A-I intron -    22028664
chr10:14972690(-) A-I intron -    22028664
chr10:14972691(-) A-I intron -    22028664
chr10:14972704(-) A-I intron -    22028664
chr10:14972705(-) A-I intron -    22028664
chr10:14972740(-) A-I intron -    22028664
chr10:14949006(-) A-I exon 3'UTR    21960545
chr10:14949134(-) A-I exon 3'UTR    21960545
chr10:14949135(-) A-I exon 3'UTR    21960545
chr10:14950122(-) A-I exon 3'UTR    21960545
chr10:14948942(-) T-C exon 3'UTR    22484847
chr10:14948997(-) T-C exon 3'UTR    22484847
chr10:14949006(-) A-G exon 3'UTR    22484847
chr10:14949007(-) T-C exon 3'UTR    22484847
chr10:14949856(-) G-A exon 3'UTR    22484847
chr10:14949976(-) A-G exon 3'UTR    22484847
chr10:14949989(-) A-G exon 3'UTR    22484847
chr10:14949998(-) A-G exon 3'UTR    22484847
chr10:14949999(-) A-G exon 3'UTR    22484847
chr10:14950021(-) A-G exon 3'UTR    22484847
chr10:14950279(-) A-G exon 3'UTR    22484847
chr10:14952503(-) T-C intron -    22484847
chr10:14956759(-) T-C intron -    22484847
chr10:14956776(-) T-C intron -    22484847
chr10:14985606(-) A-G intron -    22484847
chr10:14988124(-) A-G intron -    22484847
chr10:14988186(-) A-G intron -    22484847
chr10:14988741(-) A-G intron -    22484847
chr10:14989170(-) A-G intron -    22484847

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase DCLRE1C
chr10:14939374-14939375(-) m6A 3'UTR       24284625//24209618//24981863//22608085
chr10:14939383-14939384(-) m6A 3'UTR       24284625//24209618//24981863//22608085
chr10:14939491-14939492(-) m6A 3'UTR       24284625//24209618//24981863//27773535//22608085
chr10:14939521-14939522(-) m6A 3'UTR       24209618//24981863//22608085
chr10:14939558-14939559(-) m6A 3'UTR       24209618//24981863//22608085
chr10:14941006-14941007(-) m6A 3'UTR       -
chr10:14941030-14941031(-) m6A 3'UTR       -
chr10:14941113-14941114(-) m6A 3'UTR       -
chr10:14948905-14948906(-) m6A intron       27773535
chr10:14948948-14948949(-) m6A intron       27773535
chr10:14949025-14949026(-) m6A intron       27773535
chr10:14949052-14949053(-) m6A intron       24209618//27773535
chr10:14949188-14949189(-) m6A intron       24209618//24981863//27773535//22608085
chr10:14949269-14949270(-) m6A intron       24284625//24981863//27773535//22608085
chr10:14949283-14949284(-) m6A intron       24284625//24981863//27773535//22608085
chr10:14949303-14949304(-) m6A intron       24284625//24981863//27773535//22608085
chr10:14949326-14949327(-) m6A intron       24284625//24981863//27773535//22608085
chr10:14949357-14949358(-) m6A intron       24284625//24981863//27773535//22608085
chr10:14949391-14949392(-) m6A intron       24284625//24981863//27773535//22608085
chr10:14949405-14949406(-) m6A intron       24284625//24981863//27773535//22608085
chr10:14949448-14949449(-) m6A intron       24284625//24981863//27773535//22608085
chr10:14949483-14949484(-) m6A intron       24284625//24981863//27773535//22608085
chr10:14949541-14949542(-) m6A intron       24284625//24981863//27773535//22608085
chr10:14949555-14949556(-) m6A intron       24284625//24981863//27773535//22608085
chr10:14949612-14949613(-) m6A intron       24284625//24209618//24981863//27773535//22608085
chr10:14949651-14949652(-) m6A intron       24284625//24209618//24981863//27773535//22608085
chr10:14949678-14949679(-) m6A intron       24284625//24209618//24981863//27773535//22608085
chr10:14949687-14949688(-) m6A intron       24284625//24209618//24981863//27773535//22608085
chr10:14949762-14949763(-) m6A intron       24284625//24981863//27773535//22608085
chr10:14949773-14949774(-) m6A intron       24284625//24981863//27773535//22608085
chr10:14949833-14949834(-) m6A intron       24284625//24981863//27773535//22608085
chr10:14949838-14949839(-) m6A intron       24284625//24981863//27773535//22608085
chr10:14949886-14949887(-) m6A 3'UTR//intron       24284625//27773535//22608085
chr10:14949956-14949957(-) m6A 3'UTR//intron       24981863
chr10:14950045-14950046(-) m6A 3'UTR//intron       24209618//24981863
chr10:14950367-14950368(-) m6A 3'UTR//intron       24981863//27773535//22608085
chr10:14950603-14950604(-) m6A CDS//intron       24284625//24209618//24981863//27773535//22608085
chr10:14950625-14950626(-) m6A CDS//intron       24284625//24209618//24981863//27773535//22608085
chr10:14950709-14950710(-) m6A CDS//intron       24284625//24209618//24981863//27773535//27371828//22575960//22608085
chr10:14950748-14950749(-) m6A CDS//exon//intron       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085
chr10:14950764-14950765(-) m6A CDS//exon//intron       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085
chr10:14950788-14950789(-) m6A CDS//exon//intron       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085
chr10:14950830-14950831(-) m6A CDS//exon//intron       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085
chr10:14950850-14950851(-) m6A CDS//exon//intron       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085
chr10:14950968-14950969(-) m6A CDS//exon//intron       24981863//27773535//22608085
chr10:14951142-14951143(-) m6A CDS//exon//intron       24284625//24209618//25456834//24981863//27773535//27371828//22608085
chr10:14951191-14951192(-) m6A CDS//exon//intron       25456834//24981863
chr10:14951195-14951196(-) m6A CDS//exon//intron       24284625//24209618//25456834//24981863//27773535//27371828//22608085
chr10:14951201-14951202(-) m6A CDS//exon//intron       24284625//24209618//25456834//24981863//27773535//27371828//22608085
chr10:14951257-14951258(-) m6A CDS//exon//intron       24284625//24981863//27773535//27371828//22608085
chr10:14953204-14953205(-) m6A exon//intron       22608085
chr10:14953209-14953210(-) m6A exon//intron       22608085
chr10:14953215-14953216(-) m6A exon//intron       22608085
chr10:14961741-14961742(-) m6A CDS//exon       22608085
chr10:14961754-14961755(-) m6A CDS//exon       22608085
chr10:14961770-14961771(-) m6A CDS//exon       22608085
chr10:14961782-14961783(-) m6A CDS//exon       22608085
chr10:14989599-14989600(-) m6A 5'UTR//intron       24981863

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate DCLRE1C
Chromatin K562 cells     -
Cytosol HCC cell line (HepG2)|K562 cells     -
Exosome Blood     -
Nucleolus K562 cells     -
Nucleoplasm K562 cells     -
Nucleus K562 cells     -

Interaction Network (The top 100 interactions):


Interactor1: hbv-miR-B8-3p
Interactor2: DCLRE1C

Evidence Support:


Prediction-Evidence miRanda//RNAHybrid
Support Database VmiReg

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