Detail Information

Basic Information:


  VIRBase ID:  

VHID00563009

  Virus:  

Macacine alphaherpesvirus 1 (CeHV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hbv-miR-B8-3p:           RNLS:      

      *It may take a few minutes to display results.

Interactor Information:


Interactor1 Interactor2
Symbol hbv-miR-B8-3p RNLS
miRBase
Accession/Entrez ID
MIMAT0031768 55328
Organism Macacine alphaherpesvirus 1 (CeHV-1) Homo sapiens
Category miRNA mRNA
Alias - C10orf59//RENALASE

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR RNLS
chr10:90034312(-) A-I      3'UTR
chr10:90034304(-) A-I      3'UTR
chr10:90034365(-) A-I      3'UTR
chr10:90034320(-) A-I      3'UTR
chr10:90034340(-) A-I      3'UTR
chr10:90034336(-) A-I      3'UTR
chr10:90034335(-) A-I      3'UTR
chr10:90226094(-) A-I      intronic
chr10:90263086(-) A-I      intronic
chr10:90263069(-) A-I      intronic
chr10:90263055(-) A-I      intronic
chr10:90182785(-) A-I      intronic
chr10:90101010(-) A-I      intronic
chr10:90262916(-) A-I      intronic
chr10:90262917(-) A-I      intronic
chr10:90262920(-) A-I      intronic
chr10:90118961(-) A-I      intronic
chr10:90119026(-) A-I      intronic
chr10:90118964(-) A-I      intronic
chr10:90119028(-) A-I      intronic
chr10:90263045(-) A-I      intronic
chr10:90069724(-) A-I      intronic
chr10:90179569(-) A-I      intronic
chr10:90179691(-) A-I      intronic
chr10:90101004(-) A-I      intronic
chr10:90101003(-) A-I      intronic
chr10:90226095(-) A-I      intronic
chr10:90330814(-) A-I      intronic
chr10:90087688(-) A-I      intronic
chr10:90118925(-) A-I      intronic
chr10:90330824(-) A-I      intronic
chr10:90233715(-) A-I      intronic
Resource Symbol Editing Position Change SeqReg exReg PMID
DARNED RNLS
chr10:90084958(-) T-C intron -    22484847
chr10:90070585(-) C-T intron -    22484847
chr10:90088886(-) C-T intron -    22484847
chr10:90118841(-) T-C intron -    22484847
chr10:90118860(-) T-C intron -    22484847

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase RNLS
chr10:90044779-90044780(-) m6A 3'UTR//intron       27773535
chr10:90342976-90342977(-) m6A 5'UTR//exon       24981863//27371828
chr10:90343045-90343046(-) m6A 5'UTR//exon       24981863
chr10:90343356-90343357(-) m6A 5'UTR       24981863
chr10:90343627-90343628(-) m6A 5'UTR       24981863
chr10:90343653-90343654(-) m6A 5'UTR       24981863
chr10:90343707-90343708(-) m6A 5'UTR       24981863
chr10:90343739-90343740(-) m6A 5'UTR       24981863
chr10:90343930-90343931(-) m6A 5'UTR       -

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate RNLS
Exosome Blood     -

Interaction Network (The top 100 interactions):


Interactor1: hbv-miR-B8-3p
Interactor2: RNLS

Evidence Support:


Prediction-Evidence RNAHybrid//Targetscan
Support Database VmiReg

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