Detail Information

Basic Information:


  VIRBase ID:  

VHID00562478

  Virus:  

Macacine alphaherpesvirus 1 (CeHV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2455

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hbv-miR-B8-3p:           NBPF14:      

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Interactor Information:


Interactor1 Interactor2
Symbol hbv-miR-B8-3p NBPF14
miRBase
Accession/Entrez ID
MIMAT0031768 25832
Organism Macacine alphaherpesvirus 1 (CeHV-1) Homo sapiens
Category miRNA mRNA
Alias - DJ328E19.C1.1//NBPF

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR NBPF14
chr1:148003757(-) A-I      3'UTR
chr1:148003756(-) A-I      3'UTR
chr1:148003682(-) A-I      3'UTR
chr1:148003752(-) A-I      3'UTR
chr1:148003749(-) A-I      3'UTR
chr1:148003747(-) A-I      3'UTR
chr1:148003743(-) A-I      3'UTR
chr1:148003676(-) A-I      3'UTR
chr1:148003735(-) A-I      3'UTR
chr1:148003734(-) A-I      3'UTR
chr1:148003764(-) A-I      3'UTR
chr1:148003730(-) A-I      3'UTR
chr1:148003765(-) A-I      3'UTR
chr1:148003706(-) A-I      3'UTR
chr1:148003698(-) A-I      3'UTR
chr1:148003685(-) A-I      3'UTR
chr1:148003684(-) A-I      3'UTR
Resource Symbol Editing Position Change SeqReg exReg PMID
DARNED NBPF14
chr1:148003752(-) A-G exon 3'UTR    21725310
chr1:148006287(-) C-G exon CDS    21725310
chr1:148015713(-) T-C exon CDS    21725310

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase NBPF14
chr1:148003736-148003737(-) m6A 3'UTR       27371828
chr1:148003748-148003749(-) m6A 3'UTR       27371828
chr1:148003766-148003767(-) m6A 3'UTR       27371828
chr1:148003847-148003848(-) m6A 3'UTR       27371828
chr1:148003862-148003863(-) Y 3'UTR       26075521
chr1:148003864-148003865(-) m6A 3'UTR       27371828
chr1:148003891-148003892(-) m6A 3'UTR       27371828
chr1:148004450-148004451(-) m6A 3'UTR       27773535
chr1:148004504-148004505(-) m6A 3'UTR       27773535
chr1:148004620-148004621(-) m6A CDS       27773535
chr1:148004700-148004701(-) m6A CDS       24209618//24981863
chr1:148004743-148004744(-) m6A CDS       24209618//24981863//27371828
chr1:148005417-148005418(-) m6A CDS       25456834//27371828
chr1:148010127-148010128(-) m6A CDS//intron       27371828
chr1:148010133-148010134(-) m6A CDS//intron       27371828

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate NBPF14
Exosome Blood     -

Interaction Network (The top 100 interactions):


Interactor1: hbv-miR-B8-3p
Interactor2: NBPF14

Evidence Support:


Prediction-Evidence miRanda//PITA//RNAHybrid//Targetscan
Support Database VmiReg

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