Detail Information

Basic Information:


  VIRBase ID:  

VHID00562474

  Virus:  

Macacine alphaherpesvirus 1 (CeHV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2455

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hbv-miR-B8-3p:           DNAJB5:      

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Interactor Information:


Interactor1 Interactor2
Symbol hbv-miR-B8-3p DNAJB5
miRBase
Accession/Entrez ID
MIMAT0031768 25822
Organism Macacine alphaherpesvirus 1 (CeHV-1) Homo sapiens
Category miRNA mRNA
Alias - Hsc40

RNA Editing:


Resource Symbol Editing Position Change SeqReg exReg PMID
DARNED DNAJB5
chr9:34997530(+) A-G intron -    21725310

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase DNAJB5
chr9:34989799-34989800(+) m6A 5'UTR//CDS       24209618
chr9:34990229-34990230(+) m6A exon//intron       24209618
chr9:34993198-34993199(+) m6A 5'UTR//CDS//exon       -
chr9:34993206-34993207(+) m6A 5'UTR//CDS//exon       -
chr9:34993330-34993331(+) m6A CDS//exon       24981863
chr9:34993343-34993344(+) m6A CDS//exon       24981863
chr9:34996456-34996457(+) m6A CDS//exon       -
chr9:34996523-34996524(+) m6A 3'UTR//CDS//exon       24209618//25456834
chr9:34996552-34996553(+) m6A 3'UTR//CDS//exon       24284625//24209618//25456834//24981863
chr9:34996656-34996657(+) m6A 3'UTR//CDS//exon       24284625//24209618//25456834//24981863
chr9:34996672-34996673(+) m6A 3'UTR//CDS//exon       24284625//24209618//25456834//24981863
chr9:34996792-34996793(+) m6A 3'UTR//CDS//exon       24284625//24209618//25456834
chr9:34997044-34997045(+) m6A 3'UTR//CDS//exon       24284625//24209618
chr9:34997117-34997118(+) m6A CDS//exon       24284625//24209618//24981863
chr9:34997167-34997168(+) m6A CDS//exon       24284625//24209618//24981863
chr9:34997200-34997201(+) m6A CDS//exon       24284625//24209618//24981863
chr9:34997217-34997218(+) m6A CDS//exon       24284625//24209618//24981863
chr9:34997222-34997223(+) m6A CDS//exon       24284625//24209618//24981863
chr9:34997343-34997344(+) m6A 3'UTR//exon       24209618//24981863
chr9:34997667-34997668(+) m6A 3'UTR//exon       24209618//24981863
chr9:34997677-34997678(+) m6A 3'UTR//exon       24209618//24981863
chr9:34997824-34997825(+) m6A 3'UTR//exon       24209618//24981863
chr9:34997830-34997831(+) m6A 3'UTR//exon       24209618//24981863
chr9:34997843-34997844(+) m6A 3'UTR//exon       24209618//24981863
chr9:34998010-34998011(+) m6A 3'UTR//exon       -

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate DNAJB5
Exosome Blood     -

Interaction Network (The top 100 interactions):


Interactor1: hbv-miR-B8-3p
Interactor2: DNAJB5

Evidence Support:


Prediction-Evidence miRanda//PITA//RNAHybrid//Targetscan
Support Database VmiReg

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