Detail Information

Basic Information:


  VIRBase ID:  

VHID00562272

  Virus:  

Macacine alphaherpesvirus 1 (CeHV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hbv-miR-B8-3p:           CNKSR2:      

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Interactor Information:


Interactor1 Interactor2
Symbol hbv-miR-B8-3p CNKSR2
miRBase
Accession/Entrez ID
MIMAT0031768 22866
Organism Macacine alphaherpesvirus 1 (CeHV-1) Homo sapiens
Category miRNA mRNA
Alias - CNK2//KSR2//MAGUIN//MRXSHG

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR CNKSR2
chrX:21652713(+) A-I      intronic
chrX:21652708(+) A-I      intronic
chrX:21652701(+) A-I      intronic
chrX:21504093(+) A-I      intronic
chrX:21467270(+) A-I      intronic
chrX:21467279(+) A-I      intronic
chrX:21406269(+) A-I      intronic
chrX:21610557(+) A-I      intronic
chrX:21610556(+) A-I      intronic
chrX:21503215(+) A-I      intronic
chrX:21652734(+) A-I      intronic
chrX:21652663(+) A-I      intronic
chrX:21652682(+) A-I      intronic
chrX:21652696(+) A-I      intronic
chrX:21504097(+) A-I      intronic
chrX:21652732(+) A-I      intronic
chrX:21406224(+) A-I      intronic
chrX:21617583(+) A-I      intronic
chrX:21487843(+) A-I      intronic
chrX:21405461(+) A-I      intronic
chrX:21406278(+) A-I      intronic
chrX:21406279(+) A-I      intronic
chrX:21631911(+) A-I      intronic
chrX:21470348(+) A-I      intronic

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase CNKSR2
chrX:21392669-21392670(+) m6A 5'UTR       24981863
chrX:21392692-21392693(+) m6A 5'UTR       24981863
chrX:21392775-21392776(+) m6A 5'UTR       24981863
chrX:21392784-21392785(+) m6A 5'UTR       24981863
chrX:21392871-21392872(+) m6A 5'UTR       24981863
chrX:21613509-21613510(+) m6A CDS       24981863
chrX:21619462-21619463(+) m6A CDS       24981863
chrX:21624948-21624949(+) m6A CDS       24981863
chrX:21627323-21627324(+) m6A CDS       22575960
chrX:21627398-21627399(+) m6A CDS       24981863//22575960
chrX:21627720-21627721(+) m6A CDS       24981863
chrX:21659676-21659677(+) m6A 3'UTR//intron       24981863
chrX:21659726-21659727(+) m6A 3'UTR//intron       24981863
chrX:21659854-21659855(+) m6A 3'UTR//intron       -
chrX:21659960-21659961(+) m6A 3'UTR//intron       25456834
chrX:21660007-21660008(+) m6A 3'UTR//intron       25456834
chrX:21660027-21660028(+) m6A 3'UTR//intron       25456834
chrX:21670463-21670464(+) m6A CDS       24981863
chrX:21670472-21670473(+) m6A CDS       24981863

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate CNKSR2
Exosome Blood     -

Interaction Network (The top 100 interactions):


Interactor1: hbv-miR-B8-3p
Interactor2: CNKSR2

Evidence Support:


Prediction-Evidence miRanda//Targetscan
Support Database VmiReg

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