Detail Information

Basic Information:


  VIRBase ID:  

VHID00562223

  Virus:  

Macacine alphaherpesvirus 1 (CeHV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2455

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hbv-miR-B8-3p:           PLPBP:      

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Interactor Information:


Interactor1 Interactor2
Symbol hbv-miR-B8-3p PLPBP
miRBase
Accession/Entrez ID
MIMAT0031768 11212
Organism Macacine alphaherpesvirus 1 (CeHV-1) Homo sapiens
Category miRNA mRNA
Alias - EPVB6D//PROSC

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR PLPBP
chr8:37630825(+) A-I      intronic
chr8:37629774(+) A-I      intronic
chr8:37631221(+) A-I      intronic
chr8:37631126(+) A-I      intronic
chr8:37626060(+) A-I      intronic
chr8:37622653(+) A-I      intronic
chr8:37622559(+) A-I      intronic
chr8:37621786(+) A-I      intronic
chr8:37629748(+) A-I      intronic
chr8:37630798(+) A-I      intronic
chr8:37621939(+) A-I      intronic
chr8:37626692(+) A-I      intronic
chr8:37626691(+) A-I      intronic
chr8:37622549(+) A-I      intronic
chr8:37622061(+) A-I      intronic
chr8:37621976(+) A-I      intronic
chr8:37621969(+) A-I      intronic
chr8:37629761(+) A-I      intronic
chr8:37629747(+) A-I      intronic
chr8:37626606(+) A-I      intronic
chr8:37626190(+) A-I      intronic
chr8:37629749(+) A-I      intronic
chr8:37626173(+) A-I      intronic
chr8:37629736(+) A-I      intronic
chr8:37631234(+) A-I      intronic
chr8:37631496(+) A-I      intronic
chr8:37626176(+) A-I      intronic
chr8:37631552(+) A-I      intronic
chr8:37631586(+) A-I      intronic
chr8:37631602(+) A-I      intronic
chr8:37631733(+) A-I      intronic
chr8:37633832(+) A-I      intronic
chr8:37628993(+) A-I      intronic
chr8:37633834(+) A-I      intronic
chr8:37633835(+) A-I      intronic
chr8:37633844(+) A-I      intronic
chr8:37633847(+) A-I      intronic
chr8:37635280(+) A-I      intronic
chr8:37635300(+) A-I      intronic
chr8:37630827(+) A-I      intronic
chr8:37621778(+) A-I      intronic
chr8:37634459(+) A-I      intronic
chr8:37634389(+) A-I      intronic
chr8:37634410(+) A-I      intronic
chr8:37626598(+) A-I      intronic
chr8:37621809(+) A-I      intronic
chr8:37634384(+) A-I      intronic
chr8:37634378(+) A-I      intronic
chr8:37634547(+) A-I      intronic
chr8:37621871(+) A-I      intronic
chr8:37634565(+) A-I      intronic
chr8:37634321(+) A-I      intronic
chr8:37631473(+) A-I      intronic
chr8:37634328(+) A-I      intronic
chr8:37622527(+) A-I      intronic
chr8:37633935(+) A-I      intronic
chr8:37622581(+) A-I      intronic
chr8:37634371(+) A-I      intronic
chr8:37634451(+) A-I      intronic
chr8:37634487(+) A-I      intronic
chr8:37626674(+) A-I      intronic
chr8:37631679(+) A-I      intronic
chr8:37621965(+) A-I      intronic
chr8:37621966(+) A-I      intronic
chr8:37634414(+) A-I      intronic
chr8:37621859(+) A-I      intronic
chr8:37621926(+) A-I      intronic
chr8:37622646(+) A-I      intronic
chr8:37631128(+) A-I      intronic
chr8:37631694(+) A-I      intronic
chr8:37621768(+) A-I      intronic
chr8:37634385(+) A-I      intronic
chr8:37621804(+) A-I      intronic
chr8:37634424(+) A-I      intronic
chr8:37636436(+) A-I      3'UTR
chr8:37631170(+) A-I      intronic
chr8:37622078(+) A-I      intronic
chr8:37631608(+) A-I      intronic
chr8:37622060(+) A-I      intronic
chr8:37624401(+) A-I      intronic
chr8:37631239(+) A-I      intronic
chr8:37622628(+) A-I      intronic
chr8:37622529(+) A-I      intronic
chr8:37622577(+) A-I      intronic
chr8:37634354(+) A-I      intronic
chr8:37621879(+) A-I      intronic
chr8:37634465(+) A-I      intronic
chr8:37621901(+) A-I      intronic
chr8:37626717(+) A-I      intronic
chr8:37621747(+) A-I      intronic
chr8:37622474(+) A-I      intronic
chr8:37631538(+) A-I      intronic
chr8:37621896(+) A-I      intronic
chr8:37625457(+) A-I      intronic
chr8:37622021(+) A-I      intronic
chr8:37621979(+) A-I      intronic
chr8:37621750(+) A-I      intronic
chr8:37631578(+) A-I      intronic
chr8:37621940(+) A-I      intronic
chr8:37622020(+) A-I      intronic
chr8:37625497(+) A-I      intronic
chr8:37622621(+) A-I      intronic
chr8:37631451(+) A-I      intronic
chr8:37625591(+) A-I      intronic
chr8:37631167(+) A-I      intronic
chr8:37631256(+) A-I      intronic
chr8:37631482(+) A-I      intronic
chr8:37621909(+) A-I      intronic
chr8:37630949(+) A-I      intronic
chr8:37624413(+) A-I      intronic
chr8:37631631(+) A-I      intronic
chr8:37631654(+) A-I      intronic
chr8:37622567(+) A-I      intronic
chr8:37622568(+) A-I      intronic
chr8:37626651(+) A-I      intronic
chr8:37622686(+) A-I      intronic
chr8:37622082(+) A-I      intronic
chr8:37626739(+) A-I      intronic
chr8:37631261(+) A-I      intronic
chr8:37622487(+) A-I      intronic
chr8:37625424(+) A-I      intronic

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate PLPBP
Chromatin K562 cells     -
Cytosol Human myelogenous leukemia cell line (K-562)     21613539
Cytosol K562 cells     -
Exosome Blood     -
Nucleolus K562 cells     -
Nucleoplasm K562 cells     -
Nucleus HCC cell line (HepG2)|K562 cells     -
Ribosome HEK-293 cells     22199352

Interaction Network (The top 100 interactions):


Interactor1: hbv-miR-B8-3p
Interactor2: PLPBP

Evidence Support:


Prediction-Evidence miRanda//PITA//RNAHybrid//Targetscan
Support Database VmiReg

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