Basic Information:

  VIRBase ID:  

VHID00562026

  Virus:  

Macacine alphaherpesvirus 1 (CeHV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2455

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hbv-miR-B8-3p:  MIMAT0031768          ABCC5:  NR_135125     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	hbv-miR-B8-3p	ABCC5
miRBase Accession/Entrez ID	MIMAT0031768	10057
Organism	Macacine alphaherpesvirus 1 (CeHV-1)	Homo sapiens
Category	miRNA	mRNA
Alias	-	ABC33//EST277145//MOAT-C//MOATC//MRP5//pABC11//SMRP

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	ABCC5	chr3:183656179(-) A-I      intronic chr3:183697866(-) A-I      intronic chr3:183656314(-) A-I      intronic chr3:183656335(-) A-I      intronic chr3:183656336(-) A-I      intronic chr3:183657004(-) A-I      intronic chr3:183657017(-) A-I      intronic chr3:183657029(-) A-I      intronic chr3:183657038(-) A-I      intronic chr3:183657177(-) A-I      intronic chr3:183658743(-) A-I      intronic chr3:183697859(-) A-I      intronic chr3:183697858(-) A-I      intronic chr3:183641283(-) A-I      intronic chr3:183650918(-) A-I      intronic chr3:183658744(-) A-I      intronic chr3:183658830(-) A-I      intronic chr3:183659530(-) A-I      intronic chr3:183656300(-) A-I      intronic chr3:183659538(-) A-I      intronic chr3:183659554(-) A-I      intronic chr3:183697097(-) A-I      intronic chr3:183697836(-) A-I      intronic chr3:183653571(-) A-I      intronic chr3:183656172(-) A-I      intronic chr3:183659747(-) A-I      intronic chr3:183686080(-) A-I      intronic chr3:183697426(-) A-I      intronic chr3:183697857(-) A-I      intronic chr3:183697882(-) A-I      intronic chr3:183708113(-) A-I      intronic chr3:183715685(-) A-I      intronic chr3:183715750(-) A-I      intronic chr3:183715752(-) A-I      intronic chr3:183715786(-) A-I      intronic chr3:183715792(-) A-I      intronic chr3:183716795(-) A-I      intronic chr3:183718117(-) A-I      intronic chr3:183727702(-) A-I      intronic chr3:183727719(-) A-I      intronic chr3:183659629(-) A-I      intronic chr3:183697890(-) A-I      intronic chr3:183697867(-) A-I      intronic chr3:183688371(-) A-I      intronic chr3:183658185(-) A-I      intronic chr3:183647038(-) A-I      intronic chr3:183710077(-) A-I      intronic chr3:183687474(-) A-I      intronic chr3:183687237(-) A-I      intronic chr3:183658065(-) A-I      intronic chr3:183659966(-) A-I      intronic chr3:183649162(-) A-I      intronic chr3:183658811(-) A-I      intronic chr3:183657093(-) A-I      intronic chr3:183653562(-) A-I      intronic chr3:183653403(-) A-I      intronic chr3:183647109(-) A-I      intronic chr3:183653402(-) A-I      intronic chr3:183659528(-) A-I      intronic chr3:183657055(-) A-I      intronic chr3:183655021(-) A-I      intronic chr3:183660086(-) A-I      intronic chr3:183711134(-) A-I      intronic chr3:183650489(-) A-I      intronic chr3:183657145(-) A-I      intronic chr3:183696984(-) A-I      intronic chr3:183697070(-) A-I      intronic chr3:183659965(-) A-I      intronic chr3:183659605(-) A-I      intronic chr3:183696941(-) A-I      intronic chr3:183731315(-) A-I      intronic chr3:183657215(-) A-I      intronic chr3:183650799(-) A-I      intronic chr3:183644269(-) A-I      intronic chr3:183657099(-) A-I      intronic chr3:183658175(-) A-I      intronic chr3:183659516(-) A-I      intronic chr3:183697525(-) A-I      intronic chr3:183650790(-) A-I      intronic chr3:183711974(-) A-I      intronic chr3:183652037(-) A-I      intronic chr3:183658920(-) A-I      intronic chr3:183718925(-) A-I      3'UTR chr3:183697462(-) A-I      intronic chr3:183696985(-) A-I      intronic chr3:183659721(-) A-I      intronic chr3:183658118(-) A-I      intronic chr3:183652079(-) A-I      intronic chr3:183656210(-) A-I      intronic chr3:183641867(-) A-I      intronic chr3:183687236(-) A-I      intronic chr3:183657218(-) A-I      intronic chr3:183708973(-) A-I      intronic chr3:183658739(-) A-I      intronic chr3:183660020(-) A-I      intronic chr3:183646964(-) A-I      intronic chr3:183697895(-) A-I      intronic chr3:183658937(-) A-I      intronic chr3:183731166(-) A-I      intronic chr3:183641904(-) A-I      intronic chr3:183650793(-) A-I      intronic chr3:183641927(-) A-I      intronic chr3:183652075(-) A-I      intronic chr3:183653464(-) A-I      intronic chr3:183658867(-) A-I      intronic chr3:183688361(-) A-I      intronic chr3:183688398(-) A-I      intronic chr3:183649359(-) A-I      intronic chr3:183652012(-) A-I      intronic chr3:183659882(-) A-I      intronic chr3:183688311(-) A-I      intronic chr3:183659754(-) A-I      intronic chr3:183666627(-) A-I      intronic chr3:183641302(-) A-I      intronic chr3:183650555(-) A-I      intronic chr3:183658784(-) A-I      intronic chr3:183658943(-) A-I      intronic chr3:183686062(-) A-I      intronic chr3:183654908(-) A-I      intronic chr3:183658042(-) A-I      intronic chr3:183697485(-) A-I      intronic chr3:183658068(-) A-I      intronic chr3:183697513(-) A-I      intronic chr3:183653522(-) A-I      intronic chr3:183731235(-) A-I      intronic chr3:183650549(-) A-I      intronic chr3:183652580(-) A-I      intronic chr3:183656964(-) A-I      intronic chr3:183649304(-) A-I      intronic chr3:183641915(-) A-I      intronic chr3:183660111(-) A-I      intronic chr3:183657121(-) A-I      intronic chr3:183652042(-) A-I      intronic chr3:183711824(-) A-I      intronic chr3:183659498(-) A-I      intronic chr3:183697896(-) A-I      intronic chr3:183641981(-) A-I      intronic chr3:183712721(-) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	ABCC5	chr3:183697513(-) A-G intron -    22484847

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	ABCC5	chr3:183643464-183643465(-) m6A 3'UTR//CDS       - chr3:183643472-183643473(-) m6A 3'UTR//CDS       - chr3:183645210-183645211(-) m6A 3'UTR//CDS       - chr3:183646551-183646552(-) m6A 3'UTR//CDS       - chr3:183646577-183646578(-) m6A 3'UTR//CDS       - chr3:183667639-183667640(-) m6A 3'UTR//CDS//intron       27773535 chr3:183677562-183677563(-) m6A 3'UTR//CDS       24981863 chr3:183677576-183677577(-) m6A 3'UTR//CDS       24981863 chr3:183677604-183677605(-) m6A 3'UTR//CDS       24981863 chr3:183683027-183683028(-) m6A 3'UTR//CDS       - chr3:183685511-183685512(-) m6A 3'UTR//CDS//exon       27371828//27773536 chr3:183685548-183685549(-) m6A 3'UTR//CDS//exon       27371828//27773536 chr3:183689382-183689383(-) m6A 3'UTR//CDS//exon       27371828//27773536 chr3:183689456-183689457(-) m6A 3'UTR//CDS//exon       25456834//24981863//27773535//27371828//27773536 chr3:183689555-183689556(-) m6A 3'UTR//CDS//exon       25456834//24981863//27773535//27371828//27773536//22608085 chr3:183689588-183689589(-) m6A 3'UTR//CDS//exon       25456834//24981863//27773535//27371828//22608085 chr3:183689612-183689613(-) m6A 3'UTR//CDS//exon       24981863//27773535//22608085 chr3:183689669-183689670(-) m6A 3'UTR//CDS       27773535 chr3:183702218-183702219(-) Y 3'UTR//intron       26075521 chr3:183702248-183702249(-) m6A 3'UTR//intron       24981863//27773535//22608085 chr3:183702305-183702306(-) m6A 3'UTR//intron       24284625//24209618//25456834//24981863//27773535//22608085 chr3:183702335-183702336(-) m6A 3'UTR//intron       24284625//24209618//25456834//24981863//27773535//22608085 chr3:183702344-183702345(-) m6A 3'UTR//intron       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085 chr3:183702380-183702381(-) m6A 3'UTR//intron       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085 chr3:183702465-183702466(-) m6A 3'UTR//intron       24284625//24209618//25456834//24981863//27773535//27371828//22608085 chr3:183702512-183702513(-) m6A 3'UTR//intron       24284625//24209618//25456834//24981863//27773535//27371828//22608085 chr3:183702638-183702639(-) m6A 3'UTR//CDS//intron       24284625//25456834//24981863//27371828//22608085 chr3:183702668-183702669(-) m6A 3'UTR//CDS//intron       24981863//27371828//22608085 chr3:183705269-183705270(-) m6A 3'UTR//intron       25456834//24981863//22608085 chr3:183705299-183705300(-) m6A 3'UTR//intron       25456834//24981863//22608085 chr3:183705321-183705322(-) m6A 3'UTR//intron       25456834//22608085 chr3:183705354-183705355(-) m6A 3'UTR//intron       25456834//22608085 chr3:183707023-183707024(-) m6A 3'UTR//CDS       27773535 chr3:183732085-183732086(-) m6A CDS       24981863 chr3:183732110-183732111(-) m6A CDS       24981863 chr3:183732196-183732197(-) m6A 5'UTR       24981863 chr3:183732219-183732220(-) m6A 5'UTR       24981863

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	ABCC5	Chromatin K562 cells     - Cytosol HCC cell line (HepG2)     - Endoplasmic reticulum Human myelogenous leukemia cell line (K-562)     21613539 Exosome Blood     - Insoluble cytoplasm K562 cells     - Membrane K562 cells     - Nucleolus K562 cells     - Nucleoplasm K562 cells     - Nucleus K562 cells     - Ribosome HEK-293 cells     22199352

Interaction Network (The top 100 interactions):

Interactor1: hbv-miR-B8-3p
Interactor2: ABCC5

Evidence Support:

Prediction-Evidence	miRanda//PITA//RNAHybrid//Targetscan
Support Database	VmiReg