Basic Information:

  VIRBase ID:  

VHID00561792

  Virus:  

Macacine alphaherpesvirus 1 (CeHV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2455

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hbv-miR-B8-3p:  MIMAT0031768          DDX18:  NM_006773     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hbv-miR-B8-3p	DDX18
miRBase Accession/Entrez ID	MIMAT0031768	8886
Organism	Macacine alphaherpesvirus 1 (CeHV-1)	Homo sapiens
Category	miRNA	mRNA
Alias	-	Has1//MrDb

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	DDX18	chr2:118572649(+) A-I      ncRNA

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	DDX18	chr2:118572302-118572303(+) m6A 5'UTR       24284625//24981863 chr2:118572373-118572374(+) m6A CDS       24284625//24981863//27773535 chr2:118572402-118572403(+) m6A CDS       24284625//24981863//27773535 chr2:118572423-118572424(+) m6A CDS       24284625//24981863//27773535 chr2:118575045-118575046(+) m6A CDS//exon       24981863//27773535//22608085 chr2:118575072-118575073(+) m6A CDS//exon       24981863//27773535//22608085 chr2:118575104-118575105(+) m6A CDS//exon       24981863//27773535//22608085 chr2:118575135-118575136(+) m6A CDS//exon       24981863//27773535//22608085 chr2:118577241-118577242(+) m6A CDS//exon       24981863//27773535//22575960//22608085 chr2:118577248-118577249(+) m6A CDS//exon       24981863//27773535//22575960//22608085 chr2:118577280-118577281(+) m6A CDS//exon       24981863//27773535//22575960//22608085 chr2:118577292-118577293(+) m6A CDS//exon       24981863//27773535//22575960//22608085 chr2:118577360-118577361(+) m6A CDS//exon       24981863//27773535//22575960//22608085 chr2:118578787-118578788(+) m6A CDS//exon       27773535 chr2:118588300-118588301(+) m6A 3'UTR//exon       27773535//22608085 chr2:118588380-118588381(+) m6A 3'UTR//exon       24284625//24981863//27773535//22608085 chr2:118588394-118588395(+) m6A 3'UTR//exon       24284625//24981863//27773535//22608085 chr2:118588485-118588486(+) m6A 3'UTR//exon       24284625//24981863//22608085

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	DDX18	Chromatin K562 cells     - Cytosol Human myelogenous leukemia cell line (K-562)     21613539 Cytosol HCC cell line (HepG2)     - Exosome Blood     - Insoluble cytoplasm HCC cell line (HepG2)     - Nucleoplasm K562 cells     - Nucleus Colon cancer cells     24393600

Interaction Network (The top 100 interactions):

Interactor1: hbv-miR-B8-3p
Interactor2: DDX18

Evidence Support:

Prediction-Evidence	miRanda//PITA//RNAHybrid//Targetscan
Support Database	VmiReg