Detail Information

Basic Information:


  VIRBase ID:  

VHID00561789

  Virus:  

Macacine alphaherpesvirus 1 (CeHV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2455

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hbv-miR-B8-3p:           VNN2:      

      *It may take a few minutes to display results.

Interactor Information:


Interactor1 Interactor2
Symbol hbv-miR-B8-3p VNN2
miRBase
Accession/Entrez ID		 MIMAT0031768 8875
Organism Macacine alphaherpesvirus 1 (CeHV-1) Homo sapiens
Category miRNA mRNA
Alias - FOAP-4//GPI-80

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR VNN2
chr6:133076144(-) A-I      intronic
chr6:133076143(-) A-I      intronic
chr6:133076083(-) A-I      intronic
chr6:133079236(-) A-I      intronic
chr6:133080469(-) A-I      intronic
chr6:133076737(-) A-I      intronic
chr6:133080396(-) A-I      intronic
chr6:133079449(-) A-I      intronic
chr6:133079440(-) A-I      intronic
chr6:133074437(-) A-I      intronic
chr6:133074318(-) A-I      intronic
chr6:133079379(-) A-I      intronic
chr6:133079372(-) A-I      intronic
chr6:133074251(-) A-I      intronic
chr6:133079273(-) A-I      intronic
chr6:133074248(-) A-I      intronic
chr6:133076715(-) A-I      intronic
chr6:133076661(-) A-I      intronic
chr6:133082785(-) A-I      intronic
chr6:133082716(-) A-I      intronic
chr6:133068571(-) A-I      intronic
chr6:133066556(-) A-I      intronic
chr6:133066457(-) A-I      intronic
chr6:133076302(-) A-I      intronic
chr6:133082712(-) A-I      intronic
chr6:133082651(-) A-I      intronic
chr6:133080466(-) A-I      intronic
chr6:133081508(-) A-I      intronic
chr6:133081316(-) A-I      intronic
chr6:133080495(-) A-I      intronic
chr6:133080491(-) A-I      intronic
chr6:133076128(-) A-I      intronic
chr6:133079348(-) A-I      intronic
chr6:133081573(-) A-I      intronic
chr6:133081411(-) A-I      intronic
chr6:133081390(-) A-I      intronic
chr6:133076681(-) A-I      intronic
chr6:133076141(-) A-I      intronic
chr6:133076645(-) A-I      intronic
chr6:133081516(-) A-I      intronic
chr6:133079353(-) A-I      intronic
chr6:133076795(-) A-I      intronic
chr6:133079352(-) A-I      intronic
chr6:133081539(-) A-I      intronic
chr6:133081495(-) A-I      intronic
chr6:133079295(-) A-I      intronic
chr6:133081344(-) A-I      intronic
chr6:133068588(-) A-I      intronic
chr6:133081570(-) A-I      intronic
chr6:133081497(-) A-I      intronic
chr6:133076692(-) A-I      intronic
chr6:133079260(-) A-I      intronic
chr6:133079476(-) A-I      intronic
chr6:133082713(-) A-I      intronic
chr6:133066628(-) A-I      intronic
chr6:133080325(-) A-I      intronic
chr6:133079298(-) A-I      intronic
chr6:133076690(-) A-I      intronic
chr6:133081352(-) A-I      intronic
chr6:133081482(-) A-I      intronic
chr6:133079251(-) A-I      intronic
chr6:133076200(-) A-I      intronic
chr6:133076068(-) A-I      intronic
chr6:133081565(-) A-I      intronic
chr6:133079328(-) A-I      intronic
chr6:133076628(-) A-I      intronic
chr6:133076677(-) A-I      intronic
chr6:133080539(-) A-I      intronic
chr6:133080393(-) A-I      intronic
chr6:133076610(-) A-I      intronic
chr6:133066641(-) A-I      intronic
chr6:133081422(-) A-I      intronic
chr6:133066558(-) A-I      intronic
chr6:133076246(-) A-I      intronic
chr6:133081494(-) A-I      intronic
chr6:133076308(-) A-I      intronic
chr6:133080430(-) A-I      intronic
chr6:133081416(-) A-I      intronic
chr6:133081439(-) A-I      intronic
chr6:133080456(-) A-I      intronic
chr6:133082616(-) A-I      intronic
chr6:133082636(-) A-I      intronic
chr6:133076693(-) A-I      intronic
chr6:133074436(-) A-I      intronic
chr6:133082542(-) A-I      intronic
chr6:133079454(-) A-I      intronic
chr6:133081491(-) A-I      intronic
Resource Symbol Editing Position Change SeqReg exReg PMID
DARNED VNN2
chr6:133075040(-) A-I intron -    22327324
chr6:133076068(-) A-I intron -    22327324
chr6:133079352(-) A-I intron -    22327324
chr6:133079411(-) A-I intron -    22327324
chr6:133080539(-) A-I intron -    22327324
chr6:133081495(-) A-I intron -    22327324
chr6:133076068(-) A-G intron -    22484847
chr6:133076128(-) A-G intron -    22484847
chr6:133076610(-) A-G intron -    22484847
chr6:133076628(-) A-G intron -    22484847
chr6:133079266(-) A-G intron -    22484847
chr6:133079295(-) A-G intron -    22484847
chr6:133079298(-) A-G intron -    22484847
chr6:133079328(-) A-G intron -    22484847
chr6:133079348(-) A-G intron -    22484847
chr6:133079352(-) A-G intron -    22484847
chr6:133079353(-) A-G intron -    22484847
chr6:133079411(-) A-G intron -    22484847
chr6:133079455(-) A-G intron -    22484847
chr6:133079476(-) A-G intron -    22484847
chr6:133080325(-) A-G intron -    22484847
chr6:133080456(-) A-G intron -    22484847
chr6:133080539(-) A-G intron -    22484847
chr6:133080590(-) T-G intron -    22484847
chr6:133081344(-) A-G intron -    22484847
chr6:133081352(-) A-G intron -    22484847
chr6:133081390(-) A-G intron -    22484847
chr6:133081411(-) A-G intron -    22484847
chr6:133081416(-) A-G intron -    22484847
chr6:133081422(-) A-G intron -    22484847
chr6:133081442(-) A-G intron -    22484847
chr6:133081494(-) A-G intron -    22484847
chr6:133081495(-) A-G intron -    22484847
chr6:133081497(-) A-G intron -    22484847
chr6:133081509(-) A-G intron -    22484847
chr6:133081516(-) A-G intron -    22484847
chr6:133081539(-) A-G intron -    22484847
chr6:133081570(-) A-G intron -    22484847

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase VNN2
chr6:133065139-133065140(-) m6A 3'UTR       27773535
chr6:133065157-133065158(-) m6A 3'UTR       27773535
chr6:133065185-133065186(-) m6A 3'UTR       27773535
chr6:133065231-133065232(-) m6A 3'UTR       27773535
chr6:133065518-133065519(-) m6A 3'UTR//CDS       27773535
chr6:133065541-133065542(-) m6A 3'UTR//CDS       27773535
chr6:133065604-133065605(-) m6A 3'UTR//CDS       27773535
chr6:133070895-133070896(-) m6A 3'UTR//CDS       27773535
chr6:133070943-133070944(-) m6A 3'UTR//CDS       27773535
chr6:133070979-133070980(-) m6A 3'UTR//CDS       27773535
chr6:133072413-133072414(-) m6A 3'UTR//CDS//intron       27773535
chr6:133072433-133072434(-) m6A 3'UTR//CDS//intron       27773535
chr6:133072479-133072480(-) m6A 3'UTR//CDS//intron       27773535
chr6:133072499-133072500(-) m6A 3'UTR//CDS//intron       27773535
chr6:133072589-133072590(-) m6A 3'UTR//CDS//intron       27773535
chr6:133072603-133072604(-) m6A 3'UTR//CDS//intron       27773535

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate VNN2
Exosome Blood     -

Interaction Network (The top 100 interactions):


Interactor1: hbv-miR-B8-3p
Interactor2: VNN2

Evidence Support:


Prediction-Evidence miRanda//PITA//RNAHybrid//Targetscan
Support Database VmiReg

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