Basic Information:

  VIRBase ID:  

VHID00561696

  Virus:  

Macacine alphaherpesvirus 1 (CeHV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2455

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hbv-miR-B8-3p:  MIMAT0031768          SERF1A:  NM_021967     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hbv-miR-B8-3p	SERF1A
miRBase Accession/Entrez ID	MIMAT0031768	8293
Organism	Macacine alphaherpesvirus 1 (CeHV-1)	Homo sapiens
Category	miRNA	mRNA
Alias	-	4F5//FAM2A//H4F5//SERF1//SMAM1

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	SERF1A	chr5:70201105(+) A-I      Syn:Pro->Pro chr5:70201056(+) A-I      NonSyn:Gln->Arg chr5:70207757(+) A-I      intronic chr5:70207733(+) A-I      intronic chr5:69324774(+) A-I      intronic chr5:69324657(+) A-I      intronic chr5:70207711(+) A-I      intronic chr5:70200515(+) A-I      intronic chr5:70200466(+) A-I      intronic chr5:69324644(+) A-I      intronic chr5:70199866(+) A-I      intronic chr5:69333463(+) A-I      intronic chr5:70200505(+) A-I      intronic chr5:69333426(+) A-I      intronic chr5:69333421(+) A-I      intronic chr5:69333412(+) A-I      intronic chr5:70200563(+) A-I      intronic chr5:69325124(+) A-I      intronic chr5:70200506(+) A-I      intronic chr5:70200509(+) A-I      intronic chr5:70213790(+) A-I      3'UTR chr5:70213791(+) A-I      3'UTR chr5:70213798(+) A-I      3'UTR chr5:70213792(+) A-I      3'UTR chr5:70199651(+) A-I      intronic chr5:70204254(+) A-I      intronic chr5:70213774(+) A-I      3'UTR chr5:70213518(+) A-I      3'UTR chr5:70213475(+) A-I      3'UTR chr5:70213725(+) A-I      3'UTR chr5:70213694(+) A-I      3'UTR chr5:70205149(+) A-I      intronic chr5:69322493(+) A-I      intronic chr5:69322469(+) A-I      intronic chr5:69325225(+) A-I      intronic chr5:69328835(+) A-I      intronic chr5:69325092(+) A-I      intronic chr5:70204333(+) A-I      intronic chr5:70197911(+) A-I      intronic chr5:69328914(+) A-I      intronic chr5:70197887(+) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	SERF1A	chr5:69328835(+) A-I intron -    15258596 chr5:69328886(+) A-I intron -    15258596 chr5:69328914(+) A-I intron -    15258596 chr5:69338058(+) A-I exon 3'UTR    15342557   //15258596 chr5:69338101(+) A-I exon 3'UTR    15342557   //15258596 chr5:69338115(+) A-I exon 3'UTR    15342557   //15258596 chr5:69338255(+) A-I exon 3'UTR    15342557   //15258596 chr5:69338277(+) A-I exon 3'UTR    15342557   //15258596 chr5:69338308(+) A-I exon 3'UTR    15342557   //15258596 chr5:69338357(+) A-I exon 3'UTR    15342557   //15258596 chr5:70197874(+) A-I intron -    15258596 chr5:70197887(+) A-I intron -    15258596 chr5:70197902(+) A-I intron -    15258596 chr5:70197911(+) A-I intron -    15258596 chr5:70204254(+) A-I intron -    15258596 chr5:70204305(+) A-I intron -    15258596 chr5:70204333(+) A-I intron -    15258596 chr5:70213475(+) A-I exon 3'UTR    15258596 chr5:70213518(+) A-I exon 3'UTR    15258596 chr5:70213532(+) A-I exon 3'UTR    15258596 chr5:70213672(+) A-I exon 3'UTR    15258596 chr5:70213694(+) A-I exon 3'UTR    15258596 chr5:70213725(+) A-I exon 3'UTR    15258596 chr5:70213774(+) A-I exon 3'UTR    15258596

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	SERF1A	Cytoplasm Nasopharyngeal carcinoma cells     20498841 Exosome Blood     - Nucleus Nasopharyngeal carcinoma cells     20498841 Ribosome Colon cancer cells     24393600

Interaction Network (The top 100 interactions):

Interactor1: hbv-miR-B8-3p
Interactor2: SERF1A

Evidence Support:

Prediction-Evidence	miRanda//PITA//RNAHybrid//Targetscan
Support Database	VmiReg