Basic Information:

  VIRBase ID:  

VHID00561550

  Virus:  

Macacine alphaherpesvirus 1 (CeHV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2381

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hbv-miR-B8-3p:  MIMAT0031768          TFRC:  NM_001313965     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	hbv-miR-B8-3p	TFRC
miRBase Accession/Entrez ID	MIMAT0031768	7037
Organism	Macacine alphaherpesvirus 1 (CeHV-1)	Homo sapiens
Category	miRNA	mRNA
Alias	-	CD71//IMD46//p90//T9//TFR//TFR1//TR//TRFR

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	TFRC	chr3:195788444(-) A-I      intronic chr3:195806329(-) A-I      intronic chr3:195806357(-) A-I      intronic chr3:195806418(-) A-I      intronic chr3:195807288(-) A-I      intronic chr3:195807289(-) A-I      intronic chr3:195788426(-) A-I      intronic chr3:195784614(-) A-I      intronic chr3:195782787(-) A-I      intronic chr3:195779767(-) A-I      intronic chr3:195779739(-) A-I      intronic chr3:195779724(-) A-I      intronic chr3:195779576(-) A-I      intronic chr3:195779557(-) A-I      intronic chr3:195789285(-) A-I      intronic chr3:195798749(-) A-I      intronic chr3:195802795(-) A-I      intronic chr3:195779539(-) A-I      intronic chr3:195779531(-) A-I      intronic chr3:195779525(-) A-I      intronic chr3:195779500(-) A-I      intronic chr3:195803396(-) A-I      intronic chr3:195779494(-) A-I      intronic chr3:195779491(-) A-I      intronic chr3:195784545(-) A-I      intronic chr3:195779489(-) A-I      intronic chr3:195779482(-) A-I      intronic chr3:195779433(-) A-I      intronic chr3:195779423(-) A-I      intronic chr3:195804597(-) A-I      intronic chr3:195797396(-) A-I      intronic chr3:195797397(-) A-I      intronic chr3:195798631(-) A-I      intronic chr3:195803449(-) A-I      intronic chr3:195804560(-) A-I      intronic chr3:195803611(-) A-I      intronic chr3:195803557(-) A-I      intronic chr3:195802819(-) A-I      intronic chr3:195803506(-) A-I      intronic chr3:195803508(-) A-I      intronic chr3:195803523(-) A-I      intronic chr3:195807119(-) A-I      intronic chr3:195804264(-) A-I      intronic chr3:195804406(-) A-I      intronic chr3:195805380(-) A-I      intronic chr3:195805409(-) A-I      intronic chr3:195805416(-) A-I      intronic chr3:195802794(-) A-I      intronic chr3:195805751(-) A-I      intronic chr3:195788534(-) A-I      intronic chr3:195788554(-) A-I      intronic chr3:195788562(-) A-I      intronic chr3:195788579(-) A-I      intronic chr3:195788588(-) A-I      intronic chr3:195805428(-) A-I      intronic chr3:195805445(-) A-I      intronic chr3:195788611(-) A-I      intronic chr3:195805446(-) A-I      intronic chr3:195789186(-) A-I      intronic chr3:195789223(-) A-I      intronic chr3:195806291(-) A-I      intronic chr3:195805752(-) A-I      intronic chr3:195805673(-) A-I      intronic chr3:195805818(-) A-I      intronic chr3:195788612(-) A-I      intronic chr3:195789191(-) A-I      intronic chr3:195805838(-) A-I      intronic chr3:195776713(-) A-I      3'UTR chr3:195802734(-) A-I      intronic chr3:195803548(-) A-I      intronic chr3:195795946(-) A-I      intronic chr3:195802892(-) A-I      intronic chr3:195788632(-) A-I      intronic chr3:195807342(-) A-I      intronic chr3:195787475(-) A-I      intronic chr3:195779584(-) A-I      intronic chr3:195784605(-) A-I      intronic chr3:195805688(-) A-I      intronic chr3:195803507(-) A-I      intronic chr3:195779727(-) A-I      intronic chr3:195804248(-) A-I      intronic chr3:195797566(-) A-I      intronic chr3:195789304(-) A-I      intronic chr3:195802497(-) A-I      intronic chr3:195802926(-) A-I      intronic chr3:195789357(-) A-I      intronic chr3:195797375(-) A-I      intronic chr3:195802887(-) A-I      intronic chr3:195789007(-) A-I      intronic chr3:195804504(-) A-I      intronic chr3:195805672(-) A-I      intronic chr3:195779958(-) A-I      intronic chr3:195807274(-) A-I      intronic chr3:195803524(-) A-I      intronic chr3:195806363(-) A-I      intronic chr3:195781095(-) A-I      intronic chr3:195797374(-) A-I      intronic chr3:195807313(-) A-I      intronic chr3:195802927(-) A-I      intronic chr3:195805348(-) A-I      intronic chr3:195802861(-) A-I      intronic chr3:195788463(-) A-I      intronic chr3:195779516(-) A-I      intronic chr3:195779766(-) A-I      intronic chr3:195789256(-) A-I      intronic chr3:195789360(-) A-I      intronic chr3:195784539(-) A-I      intronic chr3:195779815(-) A-I      intronic chr3:195805753(-) A-I      intronic chr3:195807060(-) A-I      intronic chr3:195806266(-) A-I      intronic chr3:195788565(-) A-I      intronic chr3:195797789(-) A-I      intronic chr3:195789292(-) A-I      intronic chr3:195805872(-) A-I      intronic chr3:195782545(-) A-I      intronic chr3:195787425(-) A-I      intronic chr3:195786123(-) A-I      intronic chr3:195795373(-) A-I      intronic chr3:195807248(-) A-I      intronic chr3:195802962(-) A-I      intronic chr3:195783318(-) A-I      intronic chr3:195806402(-) A-I      intronic chr3:195797306(-) A-I      intronic chr3:195807139(-) A-I      intronic chr3:195807188(-) A-I      intronic chr3:195797544(-) A-I      intronic chr3:195779972(-) A-I      intronic chr3:195802740(-) A-I      intronic chr3:195804523(-) A-I      intronic chr3:195789322(-) A-I      intronic chr3:195788528(-) A-I      intronic chr3:195783403(-) A-I      intronic chr3:195802831(-) A-I      intronic chr3:195787480(-) A-I      intronic chr3:195789199(-) A-I      intronic chr3:195802796(-) A-I      intronic chr3:195788525(-) A-I      intronic chr3:195806286(-) A-I      intronic chr3:195788429(-) A-I      intronic chr3:195788466(-) A-I      intronic chr3:195802780(-) A-I      intronic chr3:195782960(-) A-I      intronic chr3:195805841(-) A-I      intronic chr3:195806361(-) A-I      intronic chr3:195797778(-) A-I      intronic chr3:195807191(-) A-I      intronic chr3:195779436(-) A-I      intronic chr3:195797584(-) A-I      intronic chr3:195789317(-) A-I      intronic chr3:195788489(-) A-I      intronic chr3:195789237(-) A-I      intronic chr3:195789295(-) A-I      intronic chr3:195802974(-) A-I      intronic chr3:195789403(-) A-I      intronic chr3:195788498(-) A-I      intronic chr3:195797300(-) A-I      intronic chr3:195795953(-) A-I      intronic chr3:195788543(-) A-I      intronic chr3:195797169(-) A-I      intronic chr3:195802957(-) A-I      intronic chr3:195779796(-) A-I      intronic chr3:195789321(-) A-I      intronic chr3:195789378(-) A-I      intronic chr3:195807343(-) A-I      intronic chr3:195788485(-) A-I      intronic chr3:195788375(-) A-I      intronic chr3:195806385(-) A-I      intronic chr3:195779585(-) A-I      intronic chr3:195797597(-) A-I      intronic chr3:195789272(-) A-I      intronic chr3:195783379(-) A-I      intronic chr3:195788446(-) A-I      intronic chr3:195804220(-) A-I      intronic chr3:195807323(-) A-I      intronic chr3:195805267(-) A-I      intronic chr3:195788418(-) A-I      intronic chr3:195802909(-) A-I      intronic chr3:195804618(-) A-I      intronic chr3:195805406(-) A-I      intronic chr3:195784630(-) A-I      intronic chr3:195788493(-) A-I      intronic chr3:195784590(-) A-I      intronic chr3:195786116(-) A-I      intronic chr3:195806448(-) A-I      intronic chr3:195779909(-) A-I      intronic chr3:195805827(-) A-I      intronic chr3:195788499(-) A-I      intronic chr3:195797557(-) A-I      intronic chr3:195803533(-) A-I      intronic chr3:195789246(-) A-I      intronic chr3:195788564(-) A-I      intronic chr3:195789231(-) A-I      intronic chr3:195789260(-) A-I      intronic chr3:195779773(-) A-I      intronic chr3:195807247(-) A-I      intronic chr3:195779903(-) A-I      intronic chr3:195797810(-) A-I      intronic chr3:195779863(-) A-I      intronic chr3:195784580(-) A-I      intronic chr3:195803213(-) A-I      intronic chr3:195789282(-) A-I      intronic chr3:195803280(-) A-I      intronic chr3:195797357(-) A-I      intronic chr3:195805858(-) A-I      intronic chr3:195779725(-) A-I      intronic chr3:195787413(-) A-I      intronic chr3:195805809(-) A-I      intronic chr3:195789240(-) A-I      intronic chr3:195807221(-) A-I      intronic chr3:195805743(-) A-I      intronic chr3:195795240(-) A-I      intronic chr3:195788598(-) A-I      intronic chr3:195789328(-) A-I      intronic chr3:195797232(-) A-I      intronic chr3:195788450(-) A-I      intronic chr3:195804501(-) A-I      intronic chr3:195789157(-) A-I      intronic chr3:195789280(-) A-I      intronic chr3:195789365(-) A-I      intronic chr3:195788458(-) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	TFRC	chr3:195795946(-) A-I intron -    15545495 chr3:195784580(-) A-I intron -    22327324 chr3:195789198(-) A-I intron -    22327324 chr3:195789282(-) A-I intron -    22327324 chr3:195789360(-) A-I intron -    22327324 chr3:195797375(-) A-I intron -    22327324 chr3:195797566(-) A-I intron -    22327324 chr3:195797802(-) A-I intron -    21960545 chr3:195779436(-) A-G intron -    22484847 chr3:195779515(-) A-G intron -    22484847 chr3:195779516(-) A-G intron -    22484847 chr3:195779796(-) A-G intron -    22484847 chr3:195779815(-) A-G intron -    22484847 chr3:195779863(-) A-G intron -    22484847 chr3:195779902(-) A-G intron -    22484847 chr3:195779909(-) A-G intron -    22484847 chr3:195779941(-) A-G intron -    22484847 chr3:195779958(-) A-G intron -    22484847 chr3:195779972(-) A-G intron -    22484847 chr3:195781119(-) G-A intron -    22484847 chr3:195783786(-) T-C intron -    22484847 chr3:195784539(-) A-G intron -    22484847 chr3:195784580(-) A-G intron -    22484847 chr3:195784590(-) A-G intron -    22484847 chr3:195784630(-) A-G intron -    22484847 chr3:195784652(-) G-T intron -    22484847 chr3:195784670(-) G-T intron -    22484847 chr3:195785885(-) T-C intron -    22484847 chr3:195787425(-) A-G intron -    22484847 chr3:195787475(-) A-G intron -    22484847 chr3:195787480(-) A-G intron -    22484847 chr3:195788396(-) A-G intron -    22484847 chr3:195788418(-) A-G intron -    22484847 chr3:195788429(-) A-G intron -    22484847 chr3:195788450(-) A-G intron -    22484847 chr3:195788458(-) A-G intron -    22484847 chr3:195788463(-) A-G intron -    22484847 chr3:195788466(-) A-G intron -    22484847 chr3:195788485(-) A-G intron -    22484847 chr3:195788489(-) A-G intron -    22484847 chr3:195788493(-) A-G intron -    22484847 chr3:195788498(-) A-G intron -    22484847 chr3:195788499(-) A-G intron -    22484847 chr3:195788525(-) A-G intron -    22484847 chr3:195788528(-) A-G intron -    22484847 chr3:195788543(-) A-G intron -    22484847 chr3:195788564(-) A-G intron -    22484847 chr3:195788565(-) A-G intron -    22484847 chr3:195788593(-) A-G intron -    22484847 chr3:195788598(-) A-G intron -    22484847 chr3:195788607(-) A-G intron -    22484847 chr3:195788632(-) A-G intron -    22484847 chr3:195789157(-) A-G intron -    22484847 chr3:195789198(-) A-G intron -    22484847 chr3:195789199(-) A-G intron -    22484847 chr3:195789231(-) A-G intron -    22484847 chr3:195789237(-) A-G intron -    22484847 chr3:195789240(-) A-G intron -    22484847 chr3:195789246(-) A-G intron -    22484847 chr3:195789260(-) A-G intron -    22484847 chr3:195789272(-) A-G intron -    22484847 chr3:195789280(-) A-G intron -    22484847 chr3:195789282(-) A-G intron -    22484847 chr3:195789292(-) A-G intron -    22484847 chr3:195789295(-) A-G intron -    22484847 chr3:195789304(-) A-G intron -    22484847 chr3:195789317(-) A-G intron -    22484847 chr3:195789321(-) A-G intron -    22484847 chr3:195789322(-) A-G intron -    22484847 chr3:195789328(-) A-G intron -    22484847 chr3:195789357(-) A-G intron -    22484847 chr3:195789360(-) A-G intron -    22484847 chr3:195789365(-) A-G intron -    22484847 chr3:195789403(-) A-G intron -    22484847 chr3:195790641(-) C-T intron -    22484847 chr3:195790681(-) T-C intron -    22484847 chr3:195790773(-) G-T intron -    22484847 chr3:195795311(-) C-T intron -    22484847 chr3:195795946(-) A-G intron -    22484847 chr3:195795953(-) A-G intron -    22484847 chr3:195797374(-) A-G intron -    22484847 chr3:195797375(-) A-G intron -    22484847 chr3:195797557(-) A-G intron -    22484847 chr3:195797566(-) A-G intron -    22484847 chr3:195797802(-) A-G intron -    22484847 chr3:195801917(-) G-T intron -    22484847 chr3:195802796(-) A-G intron -    22484847 chr3:195802807(-) A-G intron -    22484847 chr3:195802861(-) A-G intron -    22484847 chr3:195802892(-) A-G intron -    22484847 chr3:195804372(-) A-G intron -    22484847 chr3:195804504(-) A-G intron -    22484847 chr3:195804523(-) A-G intron -    22484847 chr3:195804618(-) A-G intron -    22484847 chr3:195805348(-) A-G intron -    22484847 chr3:195805406(-) A-G intron -    22484847 chr3:195805514(-) A-G intron -    22484847 chr3:195805688(-) A-G intron -    22484847 chr3:195805743(-) A-G intron -    22484847 chr3:195805753(-) A-G intron -    22484847 chr3:195805809(-) A-G intron -    22484847 chr3:195805827(-) A-G intron -    22484847 chr3:195805841(-) A-G intron -    22484847 chr3:195805858(-) A-G intron -    22484847 chr3:195805872(-) A-G intron -    22484847 chr3:195805877(-) A-G intron -    22484847 chr3:195806266(-) A-G intron -    22484847 chr3:195806280(-) A-G intron -    22484847 chr3:195806286(-) A-G intron -    22484847 chr3:195806363(-) A-G intron -    22484847 chr3:195806373(-) A-G intron -    22484847 chr3:195806385(-) A-G intron -    22484847 chr3:195806402(-) A-G intron -    22484847 chr3:195806448(-) A-G intron -    22484847 chr3:195806482(-) A-G intron -    22484847 chr3:195807188(-) A-G intron -    22484847 chr3:195807191(-) A-G intron -    22484847 chr3:195807218(-) T-G intron -    22484847 chr3:195807221(-) A-G intron -    22484847 chr3:195807247(-) A-G intron -    22484847 chr3:195807274(-) A-G intron -    22484847 chr3:195807303(-) A-G intron -    22484847 chr3:195807323(-) A-G intron -    22484847 chr3:195807342(-) A-G intron -    22484847 chr3:195807343(-) A-G intron -    22484847

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	TFRC	chr3:195778721-195778722(-) m6A 3'UTR//intron       24284625//22575960//22608085 chr3:195778761-195778762(-) m6A 3'UTR//intron       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr3:195778785-195778786(-) m6A 3'UTR//intron       24284625//24209618//25456834//24981863//28052920//26404942//27371828//22575960//22608085 chr3:195778831-195778832(-) m6A CDS//intron       24284625//24209618//25456834//24981863//28052920//26404942//27371828//22575960//22608085 chr3:195778874-195778875(-) m6A CDS//intron       24284625//24209618//25456834//24981863//28052920//26404942//27371828//22575960//22608085 chr3:195778897-195778898(-) m6A CDS//intron       24284625//24209618//25456834//24981863//28052920//26404942//27371828//22575960//22608085 chr3:195778935-195778936(-) m6A CDS//intron       24284625//24209618//25456834//24981863//28052920//26404942//27371828//22575960//22608085 chr3:195778944-195778945(-) m6A CDS//intron       24284625//24209618//25456834//24981863//28052920//26404942//27371828//22575960//22608085 chr3:195778951-195778952(-) m6A CDS//intron       24284625//24209618//25456834//24981863//28052920//26404942//27371828//22575960//22608085 chr3:195780309-195780310(-) m6A CDS       24284625//22575960 chr3:195780332-195780333(-) m6A CDS       24284625//22575960 chr3:195780363-195780364(-) m6A CDS//exon       24284625 chr3:195782020-195782021(-) m6A CDS//exon       26404942//22575960 chr3:195782026-195782027(-) m6A CDS//exon       26404942//22575960 chr3:195782049-195782050(-) m6A CDS//exon       26404942//22575960 chr3:195782098-195782099(-) m6A CDS//exon       26404942//22575960 chr3:195782124-195782125(-) m6A CDS//exon       26404942//22575960 chr3:195782137-195782138(-) m6A CDS//exon       26404942//22575960 chr3:195787132-195787133(-) m6A exon//intron       - chr3:195789754-195789755(-) Tm CDS//exon       - chr3:195792436-195792437(-) m6A CDS       26404942 chr3:195792456-195792457(-) m6A CDS       26404942 chr3:195798329-195798330(-) m6A 3'UTR//CDS       22575960 chr3:195798360-195798361(-) m6A 3'UTR//CDS       22575960 chr3:195798876-195798877(-) m6A 3'UTR//CDS       22575960 chr3:195798926-195798927(-) m6A 3'UTR//CDS       22575960 chr3:195800818-195800819(-) m6A CDS//intron       22575960 chr3:195800827-195800828(-) m6A CDS//intron       22575960 chr3:195800832-195800833(-) m6A CDS//intron       22575960 chr3:195800890-195800891(-) m6A CDS//intron       24981863//26404942//22575960 chr3:195800914-195800915(-) Cm CDS//intron       - chr3:195800924-195800925(-) m6A CDS//intron       24981863//26404942//22575960 chr3:195800934-195800935(-) m6A CDS//intron       24981863//26404942//22575960 chr3:195800948-195800949(-) m6A CDS//intron       24981863//26404942//22575960 chr3:195800955-195800956(-) m6A CDS//intron       24981863//26404942//22575960 chr3:195802059-195802060(-) m6A CDS//exon//intron       24981863//26404942//27773535 chr3:195802093-195802094(-) m6A CDS//exon//intron       24981863//26404942//27773535 chr3:195802150-195802151(-) m6A CDS//exon//intron       24981863//27773535//22575960 chr3:195802219-195802220(-) m6A CDS//exon//intron       24284625//24209618//27773535//22575960 chr3:195808893-195808894(-) m6A 5'UTR//intron       24981863 chr3:195808988-195808989(-) m6A 5'UTR       24981863

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	TFRC	Chromatin HeLa-S3 cells|K562 cells     - Cytosol HCC cell line (HepG2)|K562 cells     - Endoplasmic reticulum Human myelogenous leukemia cell line (K-562)     21613539 Endoplasmic reticulum U2OS cells     22679391 Exosome Blood     - Insoluble cytoplasm K562 cells     - Nucleolus K562 cells     - Nucleoplasm HeLa-S3 cells|K562 cells     - Nucleus Nasopharyngeal carcinoma cells     20498841 Nucleus Nasopharyngeal carcinoma cells     20498841 Nucleus Colon cancer cells     24393600 Nucleus HCC cell line (HepG2)|HeLa-S3 cells|K562 cells     - Ribosome HEK-293 cells     22199352

Interaction Network (The top 100 interactions):

Interactor1: hbv-miR-B8-3p
Interactor2: TFRC

Evidence Support:

Prediction-Evidence	miRanda//PITA//Targetscan
Support Database	VmiReg