Detail Information

Basic Information:


  VIRBase ID:  

VHID00561321

  Virus:  

Macacine alphaherpesvirus 1 (CeHV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2455

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hbv-miR-B8-3p:           PRLR:      

      *It may take a few minutes to display results.

Interactor Information:


Interactor1 Interactor2
Symbol hbv-miR-B8-3p PRLR
miRBase
Accession/Entrez ID		 MIMAT0031768 5618
Organism Macacine alphaherpesvirus 1 (CeHV-1) Homo sapiens
Category miRNA mRNA
Alias - HPRL//hPRLrI//MFAB//RI-PRLR

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR PRLR
chr5:35070735(-) A-I      intronic
chr5:35081548(-) A-I      intronic
chr5:35190701(-) A-I      intronic
chr5:35190563(-) A-I      intronic
chr5:35190569(-) A-I      intronic
chr5:35190585(-) A-I      intronic
chr5:35190591(-) A-I      intronic
chr5:35190595(-) A-I      intronic
chr5:35072219(-) A-I      intronic
chr5:35072176(-) A-I      intronic
chr5:35216093(-) A-I      intronic
chr5:35216057(-) A-I      intronic
chr5:35191284(-) A-I      intronic
chr5:35072280(-) A-I      intronic
chr5:35174371(-) A-I      intronic
chr5:35174291(-) A-I      intronic
chr5:35174424(-) A-I      intronic
chr5:35189526(-) A-I      intronic
chr5:35215948(-) A-I      intronic
chr5:35071975(-) A-I      intronic
chr5:35174374(-) A-I      intronic
chr5:35118923(-) A-I      intronic
chr5:35139297(-) A-I      intronic
chr5:35174356(-) A-I      intronic
chr5:35071785(-) A-I      intronic
chr5:35071762(-) A-I      intronic
chr5:35083848(-) A-I      intronic
chr5:35071981(-) A-I      intronic
chr5:35071974(-) A-I      intronic
Resource Symbol Editing Position Change SeqReg exReg PMID
DARNED PRLR
chr5:35056059(-) A-I exon 3'UTR    19478186
chr5:35081477(-) A-G intron -    22484847
chr5:35081554(-) A-G intron -    22484847
chr5:35083456(-) A-G intron -    22484847
chr5:35083480(-) A-G intron -    22484847

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase PRLR
chr5:35056347-35056348(-) m6A 3'UTR//intron       27773535
chr5:35056405-35056406(-) m6A 3'UTR//intron       27773535
chr5:35056419-35056420(-) m6A 3'UTR//intron       27773535
chr5:35058100-35058101(-) m6A 3'UTR//intron       27773535
chr5:35058109-35058110(-) m6A 3'UTR//intron       27773535
chr5:35058162-35058163(-) m6A 3'UTR//intron       27773535
chr5:35060128-35060129(-) m6A 3'UTR//intron       27773535
chr5:35062073-35062074(-) m6A 3'UTR//intron       27773535
chr5:35062725-35062726(-) m6A 3'UTR//intron       27773535
chr5:35062731-35062732(-) m6A 3'UTR//intron       27773535
chr5:35062805-35062806(-) m6A 3'UTR//intron       27773535
chr5:35063962-35063963(-) m6A 3'UTR//intron       27773535
chr5:35064010-35064011(-) m6A 3'UTR//intron       27773535
chr5:35064019-35064020(-) m6A 3'UTR//intron       27773535
chr5:35064861-35064862(-) m6A 3'UTR//intron       24284625//27773535
chr5:35064913-35064914(-) m6A 3'UTR//intron       24284625//27773535
chr5:35064961-35064962(-) m6A 3'UTR//intron       24284625//27773535
chr5:35065021-35065022(-) m6A 3'UTR//intron       24284625//24209618//27773535
chr5:35065101-35065102(-) m6A 3'UTR//intron       24284625//24209618//24981863//27773535
chr5:35065307-35065308(-) m6A 3'UTR//CDS//intron       24284625//24209618//27773535
chr5:35065434-35065435(-) m6A 3'UTR//CDS//intron       24284625//24209618//25456834//27773535
chr5:35065444-35065445(-) m6A 3'UTR//CDS//intron       24284625//24209618//25456834//27773535
chr5:35065470-35065471(-) m6A 3'UTR//CDS//intron       24284625//24209618//25456834//27773535
chr5:35065481-35065482(-) m6A 3'UTR//CDS//intron       24284625//24209618//25456834//27773535
chr5:35065544-35065545(-) m6A 3'UTR//CDS//intron       24284625//24209618//25456834//27773535
chr5:35065564-35065565(-) m6A 3'UTR//CDS//intron       24284625//24209618//25456834//27773535
chr5:35065603-35065604(-) m6A 3'UTR//CDS//intron       24284625//24209618//27773535
chr5:35065669-35065670(-) m6A 3'UTR//CDS//intron       24284625//24209618//27773535
chr5:35065881-35065882(-) m6A 3'UTR//CDS//intron       24284625//24209618//27773535
chr5:35065897-35065898(-) m6A 3'UTR//CDS//intron       24284625//24209618//27773535
chr5:35065961-35065962(-) m6A 3'UTR//CDS//intron       24284625//24209618//27773535
chr5:35066042-35066043(-) m6A 3'UTR//CDS//intron       24284625//24209618//27773535
chr5:35066063-35066064(-) m6A 3'UTR//CDS//intron       24284625//24209618//27773535
chr5:35066094-35066095(-) m6A 3'UTR//CDS//intron       24284625//24209618//27773535
chr5:35066133-35066134(-) m6A 3'UTR//CDS//intron       24284625//24209618//27773535
chr5:35066160-35066161(-) m6A 3'UTR//CDS//intron       24284625//24209618//27773535
chr5:35066186-35066187(-) m6A 3'UTR//CDS//intron       24284625//24209618//27773535
chr5:35130349-35130350(-) m6A 5'UTR//intron       27773535
chr5:35130369-35130370(-) m6A 5'UTR//intron       27773535
chr5:35230452-35230453(-) m6A 5'UTR       24284625//25456834
chr5:35230558-35230559(-) m6A 5'UTR       24284625//25456834//27773535
chr5:35230606-35230607(-) m6A 5'UTR       24284625//27773535
chr5:35230653-35230654(-) m6A 5'UTR       27773535

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate PRLR
Endoplasmic reticulum Human myelogenous leukemia cell line (K-562)     21613539
Exosome Blood     -

Interaction Network (The top 100 interactions):


Interactor1: hbv-miR-B8-3p
Interactor2: PRLR

Evidence Support:


Prediction-Evidence miRanda//PITA//RNAHybrid//Targetscan
Support Database VmiReg

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