Basic Information:

  VIRBase ID:  

VHID00558182

  Virus:  

Macacine alphaherpesvirus 1 (CeHV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2381

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hbv-miR-B8-5p:  MIMAT0031767          SMAP2:  NM_001198980     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	hbv-miR-B8-5p	SMAP2
miRBase Accession/Entrez ID	MIMAT0031767	64744
Organism	Macacine alphaherpesvirus 1 (CeHV-1)	Homo sapiens
Category	miRNA	mRNA
Alias	-	SMAP1L

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	SMAP2	chr1:40883509(+) A-I      intronic chr1:40869016(+) A-I      intronic chr1:40870959(+) A-I      intronic chr1:40842806(+) A-I      intronic chr1:40866788(+) A-I      intronic chr1:40869026(+) A-I      intronic chr1:40869027(+) A-I      intronic chr1:40870906(+) A-I      intronic chr1:40870911(+) A-I      intronic chr1:40870927(+) A-I      intronic chr1:40859271(+) A-I      intronic chr1:40869074(+) A-I      intronic chr1:40869581(+) A-I      intronic chr1:40869611(+) A-I      intronic chr1:40869649(+) A-I      intronic chr1:40873060(+) A-I      intronic chr1:40869655(+) A-I      intronic chr1:40869719(+) A-I      intronic chr1:40870883(+) A-I      intronic chr1:40870887(+) A-I      intronic chr1:40845467(+) A-I      intronic chr1:40871086(+) A-I      intronic chr1:40859479(+) A-I      intronic chr1:40868994(+) A-I      intronic chr1:40868288(+) A-I      intronic chr1:40868239(+) A-I      intronic chr1:40866917(+) A-I      intronic chr1:40866900(+) A-I      intronic chr1:40866880(+) A-I      intronic chr1:40866876(+) A-I      intronic chr1:40866831(+) A-I      intronic chr1:40866820(+) A-I      intronic chr1:40866754(+) A-I      intronic chr1:40866753(+) A-I      intronic chr1:40869018(+) A-I      intronic chr1:40869054(+) A-I      intronic chr1:40868992(+) A-I      intronic chr1:40866752(+) A-I      intronic chr1:40866746(+) A-I      intronic chr1:40865378(+) A-I      intronic chr1:40865308(+) A-I      intronic chr1:40865263(+) A-I      intronic chr1:40864738(+) A-I      intronic chr1:40864728(+) A-I      intronic chr1:40864688(+) A-I      intronic chr1:40858695(+) A-I      intronic chr1:40858539(+) A-I      intronic chr1:40858516(+) A-I      intronic chr1:40869025(+) A-I      intronic chr1:40845345(+) A-I      intronic chr1:40845333(+) A-I      intronic chr1:40845299(+) A-I      intronic chr1:40844246(+) A-I      intronic chr1:40843836(+) A-I      intronic chr1:40842915(+) A-I      intronic chr1:40842891(+) A-I      intronic chr1:40842847(+) A-I      intronic chr1:40842772(+) A-I      intronic chr1:40842762(+) A-I      intronic chr1:40842743(+) A-I      intronic chr1:40842738(+) A-I      intronic chr1:40842717(+) A-I      intronic chr1:40864410(+) A-I      intronic chr1:40864374(+) A-I      intronic chr1:40864026(+) A-I      intronic chr1:40859493(+) A-I      intronic chr1:40859470(+) A-I      intronic chr1:40859351(+) A-I      intronic chr1:40859347(+) A-I      intronic chr1:40859322(+) A-I      intronic chr1:40859298(+) A-I      intronic chr1:40845393(+) A-I      intronic chr1:40864729(+) A-I      intronic chr1:40864698(+) A-I      intronic chr1:40843866(+) A-I      intronic chr1:40842757(+) A-I      intronic chr1:40868201(+) A-I      intronic chr1:40865323(+) A-I      intronic chr1:40842759(+) A-I      intronic chr1:40864005(+) A-I      intronic chr1:40842851(+) A-I      intronic chr1:40868248(+) A-I      intronic chr1:40845413(+) A-I      intronic chr1:40845387(+) A-I      intronic chr1:40868261(+) A-I      intronic chr1:40869132(+) A-I      intronic chr1:40868320(+) A-I      intronic chr1:40852654(+) A-I      intronic chr1:40852664(+) A-I      intronic chr1:40875712(+) A-I      intronic chr1:40868226(+) A-I      intronic chr1:40868267(+) A-I      intronic chr1:40859480(+) A-I      intronic chr1:40868148(+) A-I      intronic chr1:40863932(+) A-I      intronic chr1:40859317(+) A-I      intronic chr1:40871003(+) A-I      intronic chr1:40842886(+) A-I      intronic chr1:40864396(+) A-I      intronic chr1:40842725(+) A-I      intronic chr1:40864428(+) A-I      intronic chr1:40858923(+) A-I      intronic chr1:40844199(+) A-I      intronic chr1:40869127(+) A-I      intronic chr1:40865319(+) A-I      intronic chr1:40842695(+) A-I      intronic chr1:40845439(+) A-I      intronic chr1:40871055(+) A-I      intronic chr1:40863957(+) A-I      intronic chr1:40868945(+) A-I      intronic chr1:40858877(+) A-I      intronic chr1:40843935(+) A-I      intronic chr1:40868306(+) A-I      intronic chr1:40865052(+) A-I      intronic chr1:40864842(+) A-I      intronic chr1:40858694(+) A-I      intronic chr1:40865106(+) A-I      intronic chr1:40859311(+) A-I      intronic chr1:40864365(+) A-I      intronic chr1:40864730(+) A-I      intronic chr1:40845404(+) A-I      intronic chr1:40858653(+) A-I      intronic chr1:40868995(+) A-I      intronic chr1:40869024(+) A-I      intronic chr1:40842776(+) A-I      intronic chr1:40864027(+) A-I      intronic chr1:40843818(+) A-I      intronic chr1:40864397(+) A-I      intronic chr1:40864780(+) A-I      intronic chr1:40852672(+) A-I      intronic chr1:40869021(+) A-I      intronic chr1:40869580(+) A-I      intronic chr1:40864034(+) A-I      intronic chr1:40873043(+) A-I      intronic chr1:40866677(+) A-I      intronic chr1:40842756(+) A-I      intronic chr1:40859373(+) A-I      intronic chr1:40858765(+) A-I      intronic chr1:40869030(+) A-I      intronic chr1:40844174(+) A-I      intronic chr1:40866676(+) A-I      intronic chr1:40861145(+) A-I      intronic chr1:40863951(+) A-I      intronic chr1:40864690(+) A-I      intronic chr1:40865041(+) A-I      intronic chr1:40858571(+) A-I      intronic chr1:40868222(+) A-I      intronic chr1:40868308(+) A-I      intronic chr1:40852739(+) A-I      intronic chr1:40865388(+) A-I      intronic chr1:40842696(+) A-I      intronic chr1:40852582(+) A-I      intronic chr1:40863950(+) A-I      intronic chr1:40870890(+) A-I      intronic chr1:40868161(+) A-I      intronic chr1:40842724(+) A-I      intronic chr1:40842793(+) A-I      intronic chr1:40843816(+) A-I      intronic chr1:40846319(+) A-I      intronic chr1:40842702(+) A-I      intronic chr1:40868225(+) A-I      intronic chr1:40870899(+) A-I      intronic chr1:40844236(+) A-I      intronic chr1:40864840(+) A-I      intronic chr1:40864760(+) A-I      intronic chr1:40864411(+) A-I      intronic chr1:40865361(+) A-I      intronic chr1:40870979(+) A-I      intronic chr1:40859366(+) A-I      intronic chr1:40869179(+) A-I      intronic chr1:40865108(+) A-I      intronic chr1:40858892(+) A-I      intronic chr1:40869129(+) A-I      intronic chr1:40858864(+) A-I      intronic chr1:40868251(+) A-I      intronic chr1:40865259(+) A-I      intronic chr1:40843923(+) A-I      intronic chr1:40869589(+) A-I      intronic chr1:40858489(+) A-I      intronic chr1:40871005(+) A-I      intronic chr1:40863925(+) A-I      intronic chr1:40843882(+) A-I      intronic chr1:40863964(+) A-I      intronic chr1:40868303(+) A-I      intronic chr1:40872901(+) A-I      intronic chr1:40868221(+) A-I      intronic chr1:40858624(+) A-I      intronic chr1:40864733(+) A-I      intronic chr1:40866814(+) A-I      intronic chr1:40869516(+) A-I      intronic chr1:40845478(+) A-I      intronic chr1:40875756(+) A-I      intronic chr1:40864934(+) A-I      intronic chr1:40864737(+) A-I      intronic chr1:40858613(+) A-I      intronic chr1:40869066(+) A-I      intronic chr1:40843814(+) A-I      intronic chr1:40865253(+) A-I      intronic chr1:40869709(+) A-I      intronic chr1:40843913(+) A-I      intronic chr1:40842748(+) A-I      intronic chr1:40858659(+) A-I      intronic chr1:40864002(+) A-I      intronic chr1:40842843(+) A-I      intronic chr1:40864707(+) A-I      intronic chr1:40864398(+) A-I      intronic chr1:40859401(+) A-I      intronic chr1:40859318(+) A-I      intronic chr1:40842703(+) A-I      intronic chr1:40863970(+) A-I      intronic chr1:40864752(+) A-I      intronic chr1:40859392(+) A-I      intronic chr1:40873036(+) A-I      intronic chr1:40869043(+) A-I      intronic chr1:40842901(+) A-I      intronic chr1:40864706(+) A-I      intronic chr1:40868186(+) A-I      intronic chr1:40864450(+) A-I      intronic chr1:40866747(+) A-I      intronic chr1:40868263(+) A-I      intronic chr1:40858627(+) A-I      intronic chr1:40858563(+) A-I      intronic chr1:40864018(+) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	SMAP2	chr1:40843866(+) A-I intron -    22327324 chr1:40858627(+) A-I intron -    22327324 chr1:40864396(+) A-I intron -    22327324 chr1:40864411(+) A-I intron -    22327324 chr1:40865253(+) A-I intron -    22327324 chr1:40868222(+) A-I intron -    22327324 chr1:40869126(+) A-I intron -    22327324 chr1:40844199(+) A-I intron -    21960545 chr1:40864034(+) A-I intron -    21960545 chr1:40842683(+) T-G intron -    22484847 chr1:40842695(+) A-G intron -    22484847 chr1:40842696(+) A-G intron -    22484847 chr1:40842703(+) A-G intron -    22484847 chr1:40842724(+) A-G intron -    22484847 chr1:40842725(+) A-G intron -    22484847 chr1:40842748(+) A-G intron -    22484847 chr1:40842757(+) A-G intron -    22484847 chr1:40842776(+) A-G intron -    22484847 chr1:40842793(+) A-G intron -    22484847 chr1:40842843(+) A-G intron -    22484847 chr1:40842886(+) A-G intron -    22484847 chr1:40842901(+) A-G intron -    22484847 chr1:40843814(+) A-G intron -    22484847 chr1:40843866(+) A-G intron -    22484847 chr1:40843913(+) A-G intron -    22484847 chr1:40844174(+) A-G intron -    22484847 chr1:40844199(+) A-G intron -    22484847 chr1:40844236(+) A-G intron -    22484847 chr1:40845387(+) A-G intron -    22484847 chr1:40845404(+) A-G intron -    22484847 chr1:40845413(+) A-G intron -    22484847 chr1:40845439(+) A-G intron -    22484847 chr1:40846215(+) C-T intron -    22484847 chr1:40846220(+) G-T intron -    22484847 chr1:40849573(+) C-T intron -    22484847 chr1:40849656(+) G-C intron -    22484847 chr1:40852525(+) C-T intron -    22484847 chr1:40852582(+) A-G intron -    22484847 chr1:40858613(+) A-G intron -    22484847 chr1:40858624(+) A-G intron -    22484847 chr1:40858627(+) A-G intron -    22484847 chr1:40858765(+) A-G intron -    22484847 chr1:40858881(+) C-A intron -    22484847 chr1:40858882(+) C-G intron -    22484847 chr1:40858883(+) A-T intron -    22484847 chr1:40859311(+) A-G intron -    22484847 chr1:40859317(+) A-G intron -    22484847 chr1:40859318(+) A-G intron -    22484847 chr1:40859373(+) A-G intron -    22484847 chr1:40861145(+) A-G intron -    22484847 chr1:40863925(+) A-G intron -    22484847 chr1:40863957(+) A-G intron -    22484847 chr1:40864002(+) A-G intron -    22484847 chr1:40864005(+) A-G intron -    22484847 chr1:40864027(+) A-G intron -    22484847 chr1:40864034(+) A-G intron -    22484847 chr1:40864365(+) A-G intron -    22484847 chr1:40864396(+) A-G intron -    22484847 chr1:40864397(+) A-G intron -    22484847 chr1:40864398(+) A-G intron -    22484847 chr1:40864428(+) A-G intron -    22484847 chr1:40864690(+) A-G intron -    22484847 chr1:40864698(+) A-G intron -    22484847 chr1:40864729(+) A-G intron -    22484847 chr1:40864730(+) A-G intron -    22484847 chr1:40864733(+) A-G intron -    22484847 chr1:40864737(+) A-G intron -    22484847 chr1:40864752(+) A-G intron -    22484847 chr1:40864760(+) A-G intron -    22484847 chr1:40864840(+) A-G intron -    22484847 chr1:40865041(+) A-G intron -    22484847 chr1:40865052(+) A-G intron -    22484847 chr1:40865106(+) A-G intron -    22484847 chr1:40865108(+) A-G intron -    22484847 chr1:40865253(+) A-G intron -    22484847 chr1:40865319(+) A-G intron -    22484847 chr1:40866688(+) C-T intron -    22484847 chr1:40866747(+) A-G intron -    22484847 chr1:40868148(+) A-G intron -    22484847 chr1:40868161(+) A-G intron -    22484847 chr1:40868186(+) A-G intron -    22484847 chr1:40868201(+) A-G intron -    22484847 chr1:40868209(+) A-C intron -    22484847 chr1:40868221(+) A-G intron -    22484847 chr1:40868222(+) A-G intron -    22484847 chr1:40868225(+) A-G intron -    22484847 chr1:40868226(+) A-G intron -    22484847 chr1:40868248(+) A-G intron -    22484847 chr1:40868251(+) A-G intron -    22484847 chr1:40868261(+) A-G intron -    22484847 chr1:40868263(+) A-G intron -    22484847 chr1:40868267(+) A-G intron -    22484847 chr1:40868306(+) A-G intron -    22484847 chr1:40868308(+) A-G intron -    22484847 chr1:40868320(+) A-G intron -    22484847 chr1:40869043(+) A-G intron -    22484847 chr1:40869127(+) A-G intron -    22484847 chr1:40869129(+) A-G intron -    22484847 chr1:40869516(+) A-G intron -    22484847 chr1:40869580(+) A-G intron -    22484847 chr1:40869709(+) A-G intron -    22484847 chr1:40870899(+) A-G intron -    22484847 chr1:40870979(+) A-G intron -    22484847 chr1:40871055(+) A-G intron -    22484847 chr1:40885243(+) C-T intron -    22484847

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	SMAP2	chr1:40839435-40839436(+) m6A 5'UTR//intron       24209618//25456834//24981863 chr1:40839463-40839464(+) m6A 5'UTR//intron       24209618//25456834//24981863 chr1:40839705-40839706(+) m6A 5'UTR//intron       - chr1:40839726-40839727(+) m6A 5'UTR//intron       - chr1:40875478-40875479(+) m6A CDS       24981863 chr1:40875490-40875491(+) m6A CDS       24981863 chr1:40878722-40878723(+) m6A CDS       24981863 chr1:40878746-40878747(+) m6A CDS       24981863 chr1:40882717-40882718(+) m6A CDS       24284625//24981863//22608085 chr1:40882757-40882758(+) m6A CDS       24284625//24981863//26404942//27773535//22608085 chr1:40887672-40887673(+) m6A CDS       24284625//24981863//26404942//27773535//22608085 chr1:40887699-40887700(+) m6A CDS       24284625//24981863//26404942//27773535//22608085 chr1:40887706-40887707(+) m6A CDS       24284625//24981863//26404942//27773535//22608085 chr1:40887730-40887731(+) m6A CDS       24284625//24981863//26404942//27773535//22608085 chr1:40887746-40887747(+) m6A CDS       24284625//24981863//26404942//27773535//22608085 chr1:40887775-40887776(+) m6A 3'UTR       24284625//24981863//26404942//22608085 chr1:40887780-40887781(+) m6A 3'UTR       24284625//24981863//26404942//22608085 chr1:40887934-40887935(+) m6A 3'UTR       - chr1:40887942-40887943(+) m6A 3'UTR       -

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	SMAP2	Chromatin K562 cells     - Cytosol HCC cell line (HepG2)|K562 cells     - Exosome Blood     - Insoluble cytoplasm K562 cells     - Membrane K562 cells     - Nucleolus K562 cells     - Nucleoplasm K562 cells     - Nucleus K562 cells     - Ribosome Colon cancer cells     24393600

Interaction Network (The top 100 interactions):

Interactor1: hbv-miR-B8-5p
Interactor2: SMAP2

Evidence Support:

Prediction-Evidence	miRanda//RNAHybrid//Targetscan
Support Database	VmiReg