Basic Information:

  VIRBase ID:  

VHID00558102

  Virus:  

Macacine alphaherpesvirus 1 (CeHV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2381

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hbv-miR-B8-5p:  MIMAT0031767          VIPAS39:  NM_001193315     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	hbv-miR-B8-5p	VIPAS39
miRBase Accession/Entrez ID	MIMAT0031767	63894
Organism	Macacine alphaherpesvirus 1 (CeHV-1)	Homo sapiens
Category	miRNA	mRNA
Alias	-	C14orf133//hSPE-39//SPE-39//SPE39//VIPAR//VPS16B

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	VIPAS39	chr14:77905913(-) A-I      intronic chr14:77912220(-) A-I      intronic chr14:77899819(-) A-I      intronic chr14:77906500(-) A-I      intronic chr14:77911874(-) A-I      intronic chr14:77905908(-) A-I      intronic chr14:77907279(-) A-I      intronic chr14:77907333(-) A-I      intronic chr14:77907334(-) A-I      intronic chr14:77911080(-) A-I      intronic chr14:77911907(-) A-I      intronic chr14:77911390(-) A-I      intronic chr14:77904771(-) A-I      intronic chr14:77905938(-) A-I      intronic chr14:77911474(-) A-I      intronic chr14:77906431(-) A-I      intronic chr14:77913478(-) A-I      intronic chr14:77905912(-) A-I      intronic chr14:77911471(-) A-I      intronic chr14:77906499(-) A-I      intronic chr14:77904709(-) A-I      intronic chr14:77906091(-) A-I      intronic chr14:77906105(-) A-I      intronic chr14:77911440(-) A-I      intronic chr14:77906324(-) A-I      intronic chr14:77899611(-) A-I      intronic chr14:77905873(-) A-I      intronic chr14:77912037(-) A-I      intronic chr14:77911962(-) A-I      intronic chr14:77912754(-) A-I      intronic chr14:77905919(-) A-I      intronic chr14:77918906(-) A-I      intronic chr14:77896938(-) A-I      intronic chr14:77913507(-) A-I      intronic chr14:77912133(-) A-I      intronic chr14:77911477(-) A-I      intronic chr14:77906040(-) A-I      intronic chr14:77906448(-) A-I      intronic chr14:77906423(-) A-I      intronic chr14:77906010(-) A-I      intronic chr14:77906513(-) A-I      intronic chr14:77905979(-) A-I      intronic chr14:77906012(-) A-I      intronic chr14:77906025(-) A-I      intronic chr14:77899747(-) A-I      intronic chr14:77911938(-) A-I      intronic chr14:77904845(-) A-I      intronic chr14:77911012(-) A-I      intronic chr14:77899612(-) A-I      intronic chr14:77911054(-) A-I      intronic chr14:77904809(-) A-I      intronic chr14:77906398(-) A-I      intronic chr14:77896960(-) A-I      intronic chr14:77911858(-) A-I      intronic chr14:77912077(-) A-I      intronic chr14:77899681(-) A-I      intronic chr14:77897013(-) A-I      intronic chr14:77905925(-) A-I      intronic chr14:77906022(-) A-I      intronic chr14:77899682(-) A-I      intronic chr14:77904766(-) A-I      intronic chr14:77911937(-) A-I      intronic chr14:77897008(-) A-I      intronic

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	VIPAS39	chr14:77893278-77893279(-) m6A 3'UTR       27773535 chr14:77893314-77893315(-) m6A 3'UTR       27773535 chr14:77893342-77893343(-) m6A 3'UTR       24284625//24981863//27773535 chr14:77893367-77893368(-) m6A 3'UTR       24284625//24209618//24981863//27773535//22608085 chr14:77893453-77893454(-) m6A 3'UTR       24284625//24209618//25456834//24981863//28052920//27773535//27371828//22608085 chr14:77893462-77893463(-) m6A 3'UTR       24284625//24209618//25456834//24981863//28052920//27773535//27371828//22608085 chr14:77893488-77893489(-) m6A 3'UTR       24284625//24209618//25456834//24981863//28052920//27773535//27371828//22608085 chr14:77893528-77893529(-) m6A 3'UTR       24284625//24209618//25456834//24981863//28052920//27773535//27371828//22608085 chr14:77893533-77893534(-) m6A 3'UTR       24284625//24209618//25456834//24981863//28052920//27773535//27371828//22608085 chr14:77893565-77893566(-) m6A 3'UTR       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//22608085 chr14:77893577-77893578(-) m6A 3'UTR       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//22608085 chr14:77893644-77893645(-) Cm 3'UTR       - chr14:77893786-77893787(-) m6A 3'UTR       24981863//22608085 chr14:77893806-77893807(-) m6A 3'UTR       24981863 chr14:77901706-77901707(-) m6A CDS//exon       27773535 chr14:77902223-77902224(-) m6A CDS//exon       27773535 chr14:77904160-77904161(-) m6A CDS//exon       27773535 chr14:77904189-77904190(-) m6A CDS//exon       27773535 chr14:77904198-77904199(-) m6A CDS//exon       27773535 chr14:77906642-77906643(-) m6A exon//intron       27773535 chr14:77915653-77915654(-) m6A CDS//exon       - chr14:77917652-77917653(-) m6A CDS//exon//intron       27773535 chr14:77919651-77919652(-) m6A CDS//exon       27773535 chr14:77919706-77919707(-) m6A CDS//exon       27773535 chr14:77920407-77920408(-) m6A CDS       - chr14:77920435-77920436(-) m6A CDS       - chr14:77923454-77923455(-) m6A 5'UTR//intron       - chr14:77923630-77923631(-) m6A 5'UTR//exon//intron       24981863 chr14:77924190-77924191(-) m6A exon       24981863 chr14:77924212-77924213(-) m6A exon       24981863 chr14:77924219-77924220(-) m6A exon       24981863 chr14:77924258-77924259(-) m6A exon       24981863 chr14:77924292-77924293(-) m6A exon       24981863

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	VIPAS39	Chromatin K562 cells     - Cytosol Human myelogenous leukemia cell line (K-562)     21613539 Cytosol K562 cells     - Exosome Blood     - Nucleoplasm K562 cells     - Nucleus K562 cells     -

Interaction Network (The top 100 interactions):

Interactor1: hbv-miR-B8-5p
Interactor2: VIPAS39

Evidence Support:

Prediction-Evidence	miRanda//RNAHybrid//Targetscan
Support Database	VmiReg