Basic Information:

  VIRBase ID:  

VHID00557286

  Virus:  

Macacine alphaherpesvirus 1 (CeHV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hbv-miR-B8-5p:  MIMAT0031767          RTF2:  NM_001283037     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hbv-miR-B8-5p	RTF2
miRBase Accession/Entrez ID	MIMAT0031767	51507
Organism	Macacine alphaherpesvirus 1 (CeHV-1)	Homo sapiens
Category	miRNA	mRNA
Alias	-	C20orf43//CDAO5//HSPC164//RTFDC1//SHUJUN-3

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	RTF2	chr20:55078873(+) A-I      intronic chr20:55078913(+) A-I      intronic chr20:55076848(+) A-I      intronic chr20:55087185(+) A-I      intronic chr20:55090018(+) A-I      intronic chr20:55081898(+) A-I      intronic chr20:55080423(+) A-I      intronic chr20:55078987(+) A-I      intronic chr20:55078965(+) A-I      intronic chr20:55078904(+) A-I      intronic chr20:55078877(+) A-I      intronic chr20:55078870(+) A-I      intronic chr20:55078867(+) A-I      intronic chr20:55078778(+) A-I      intronic chr20:55084549(+) A-I      intronic chr20:55084610(+) A-I      intronic chr20:55084624(+) A-I      intronic chr20:55067552(+) A-I      intronic chr20:55076844(+) A-I      intronic chr20:55090024(+) A-I      intronic chr20:55090030(+) A-I      intronic chr20:55067556(+) A-I      intronic chr20:55067575(+) A-I      intronic chr20:55067978(+) A-I      intronic chr20:55076008(+) A-I      intronic chr20:55075861(+) A-I      intronic chr20:55075860(+) A-I      intronic chr20:55073444(+) A-I      intronic chr20:55073355(+) A-I      intronic chr20:55048837(+) A-I      intronic chr20:55052660(+) A-I      intronic chr20:55067308(+) A-I      intronic chr20:55081850(+) A-I      intronic chr20:55067354(+) A-I      intronic chr20:55067550(+) A-I      intronic chr20:55087183(+) A-I      intronic chr20:55087102(+) A-I      intronic chr20:55087100(+) A-I      intronic chr20:55087097(+) A-I      intronic chr20:55087006(+) A-I      intronic chr20:55084548(+) A-I      intronic chr20:55081891(+) A-I      intronic chr20:55081886(+) A-I      intronic chr20:55052625(+) A-I      intronic chr20:55052749(+) A-I      intronic chr20:55080360(+) A-I      intronic chr20:55064189(+) A-I      intronic chr20:55063352(+) A-I      intronic chr20:55080483(+) A-I      intronic chr20:55084402(+) A-I      intronic chr20:55081896(+) A-I      intronic chr20:55046573(+) A-I      intronic chr20:55065753(+) A-I      intronic chr20:55061625(+) A-I      intronic chr20:55065670(+) A-I      intronic chr20:55078887(+) A-I      intronic chr20:55067320(+) A-I      intronic chr20:55058599(+) A-I      intronic chr20:55053342(+) A-I      intronic chr20:55068070(+) A-I      intronic chr20:55081938(+) A-I      intronic chr20:55078949(+) A-I      intronic

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	RTF2	Chromatin K562 cells     - Cytosol Human myelogenous leukemia cell line (K-562)     21613539 Cytosol HCC cell line (HepG2)     - Exosome Blood     - Insoluble cytoplasm HCC cell line (HepG2)     - Nucleolus K562 cells     - Nucleoplasm K562 cells     - Nucleus HCC cell line (HepG2)|K562 cells     - Ribosome Colon cancer cells     24393600

Interaction Network (The top 100 interactions):

Interactor1: hbv-miR-B8-5p
Interactor2: RTF2

Evidence Support:

Prediction-Evidence	miRanda//RNAHybrid
Support Database	VmiReg