Detail Information

Basic Information:


  VIRBase ID:  

VHID00556823

  Virus:  

Macacine alphaherpesvirus 1 (CeHV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hbv-miR-B8-5p:           SSBP3:      

      *It may take a few minutes to display results.

Interactor Information:


Interactor1 Interactor2
Symbol hbv-miR-B8-5p SSBP3
miRBase
Accession/Entrez ID		 MIMAT0031767 23648
Organism Macacine alphaherpesvirus 1 (CeHV-1) Homo sapiens
Category miRNA mRNA
Alias - CSDP//SSDP//SSDP1

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR SSBP3
chr1:54852425(-) A-I      intronic
chr1:54729756(-) A-I      intronic
chr1:54803580(-) A-I      intronic
chr1:54729770(-) A-I      intronic
chr1:54729771(-) A-I      intronic
chr1:54729791(-) A-I      intronic
chr1:54729789(-) A-I      intronic
chr1:54698138(-) A-I      intronic
chr1:54700224(-) A-I      intronic
chr1:54852432(-) A-I      intronic
chr1:54729753(-) A-I      intronic
chr1:54700205(-) A-I      intronic
chr1:54698102(-) A-I      intronic
chr1:54803610(-) A-I      intronic
chr1:54729769(-) A-I      intronic
chr1:54700180(-) A-I      intronic
chr1:54721621(-) A-I      intronic
chr1:54817726(-) A-I      intronic
chr1:54847637(-) A-I      intronic
chr1:54859197(-) A-I      intronic
chr1:54859218(-) A-I      intronic
chr1:54859297(-) A-I      intronic
chr1:54859591(-) A-I      intronic
chr1:54859699(-) A-I      intronic
chr1:54698090(-) A-I      intronic
chr1:54698003(-) A-I      intronic
chr1:54693453(-) A-I      intronic
chr1:54693427(-) A-I      intronic
chr1:54693426(-) A-I      intronic
chr1:54693424(-) A-I      intronic
chr1:54860468(-) A-I      intronic
chr1:54698235(-) A-I      intronic
chr1:54812872(-) A-I      intronic
chr1:54783690(-) A-I      intronic
chr1:54811499(-) A-I      intronic
chr1:54811922(-) A-I      intronic
chr1:54812364(-) A-I      intronic
chr1:54812380(-) A-I      intronic
chr1:54812425(-) A-I      intronic
chr1:54812844(-) A-I      intronic
chr1:54812860(-) A-I      intronic
chr1:54812892(-) A-I      intronic
chr1:54812920(-) A-I      intronic
chr1:54816636(-) A-I      intronic
chr1:54816772(-) A-I      intronic
chr1:54783583(-) A-I      intronic
chr1:54783577(-) A-I      intronic
chr1:54783576(-) A-I      intronic
chr1:54783550(-) A-I      intronic
chr1:54783541(-) A-I      intronic
chr1:54783110(-) A-I      intronic
chr1:54783016(-) A-I      intronic
chr1:54782993(-) A-I      intronic
chr1:54782966(-) A-I      intronic
chr1:54781953(-) A-I      intronic
chr1:54781581(-) A-I      intronic
chr1:54781547(-) A-I      intronic
chr1:54778108(-) A-I      intronic
chr1:54778099(-) A-I      intronic
chr1:54778080(-) A-I      intronic
chr1:54768145(-) A-I      intronic
chr1:54749874(-) A-I      intronic
chr1:54721645(-) A-I      intronic
chr1:54721636(-) A-I      intronic
chr1:54721565(-) A-I      intronic
chr1:54720558(-) A-I      intronic
chr1:54715314(-) A-I      intronic
chr1:54701393(-) A-I      intronic
chr1:54701290(-) A-I      intronic
chr1:54701286(-) A-I      intronic
chr1:54701264(-) A-I      intronic
chr1:54701263(-) A-I      intronic
chr1:54700499(-) A-I      intronic
chr1:54700218(-) A-I      intronic
chr1:54847967(-) A-I      intronic
chr1:54700139(-) A-I      intronic
chr1:54812845(-) A-I      intronic
chr1:54812298(-) A-I      intronic
chr1:54729944(-) A-I      intronic
chr1:54783098(-) A-I      intronic
chr1:54709734(-) A-I      intronic
chr1:54816779(-) A-I      intronic
chr1:54783128(-) A-I      intronic
chr1:54698186(-) A-I      intronic
chr1:54813146(-) A-I      intronic
chr1:54715322(-) A-I      intronic
chr1:54812908(-) A-I      intronic
chr1:54847949(-) A-I      intronic
chr1:54721623(-) A-I      intronic
chr1:54721662(-) A-I      intronic
chr1:54700252(-) A-I      intronic
chr1:54859715(-) A-I      intronic
chr1:54805468(-) A-I      intronic
chr1:54783115(-) A-I      intronic
chr1:54720685(-) A-I      intronic
chr1:54736794(-) A-I      intronic
chr1:54781407(-) A-I      intronic
chr1:54701986(-) A-I      intronic
chr1:54720670(-) A-I      intronic
chr1:54803337(-) A-I      intronic
chr1:54781761(-) A-I      intronic
chr1:54816622(-) A-I      intronic
chr1:54859722(-) A-I      intronic
chr1:54720627(-) A-I      intronic
chr1:54783204(-) A-I      intronic
chr1:54700121(-) A-I      intronic
chr1:54855550(-) A-I      intronic
chr1:54781895(-) A-I      intronic
chr1:54747548(-) A-I      intronic
chr1:54783037(-) A-I      intronic
chr1:54852441(-) A-I      intronic
chr1:54720683(-) A-I      intronic
chr1:54700565(-) A-I      intronic
chr1:54852486(-) A-I      intronic
chr1:54852473(-) A-I      intronic
chr1:54812932(-) A-I      intronic
chr1:54816626(-) A-I      intronic
chr1:54817784(-) A-I      intronic
chr1:54721703(-) A-I      intronic
chr1:54846573(-) A-I      intronic
chr1:54783535(-) A-I      intronic
chr1:54698151(-) A-I      intronic
chr1:54720684(-) A-I      intronic
chr1:54817722(-) A-I      intronic
chr1:54805364(-) A-I      intronic
chr1:54697999(-) A-I      intronic
chr1:54812376(-) A-I      intronic
chr1:54811898(-) A-I      intronic
chr1:54700236(-) A-I      intronic
chr1:54812773(-) A-I      intronic
chr1:54783678(-) A-I      intronic
chr1:54803584(-) A-I      intronic
chr1:54781897(-) A-I      intronic
chr1:54700569(-) A-I      intronic
chr1:54721702(-) A-I      intronic
chr1:54813141(-) A-I      intronic
chr1:54698068(-) A-I      intronic
chr1:54708576(-) A-I      intronic
chr1:54781855(-) A-I      intronic
chr1:54813125(-) A-I      intronic
chr1:54812323(-) A-I      intronic
chr1:54721711(-) A-I      intronic
chr1:54721492(-) A-I      intronic
chr1:54781459(-) A-I      intronic
chr1:54778887(-) A-I      intronic
chr1:54708611(-) A-I      intronic
chr1:54783007(-) A-I      intronic
chr1:54700229(-) A-I      intronic
chr1:54700081(-) A-I      intronic
chr1:54700484(-) A-I      intronic
chr1:54852488(-) A-I      intronic
chr1:54721579(-) A-I      intronic
chr1:54702143(-) A-I      intronic
chr1:54781602(-) A-I      intronic
chr1:54709741(-) A-I      intronic
chr1:54783705(-) A-I      intronic
chr1:54779284(-) A-I      intronic
chr1:54700558(-) A-I      intronic
chr1:54803585(-) A-I      intronic
chr1:54742066(-) A-I      intronic
chr1:54698168(-) A-I      intronic
chr1:54721543(-) A-I      intronic
chr1:54778100(-) A-I      intronic
chr1:54803435(-) A-I      intronic
chr1:54803418(-) A-I      intronic
chr1:54812799(-) A-I      intronic
chr1:54700231(-) A-I      intronic
chr1:54778018(-) A-I      intronic
chr1:54730364(-) A-I      intronic
chr1:54700573(-) A-I      intronic
chr1:54720779(-) A-I      intronic
chr1:54848476(-) A-I      intronic
chr1:54698230(-) A-I      intronic
chr1:54698095(-) A-I      intronic
chr1:54779710(-) A-I      intronic
chr1:54768082(-) A-I      intronic
chr1:54721686(-) A-I      intronic
chr1:54847684(-) A-I      intronic
chr1:54781506(-) A-I      intronic
chr1:54693340(-) A-I      intronic
chr1:54781486(-) A-I      intronic
chr1:54720630(-) A-I      intronic
chr1:54700166(-) A-I      intronic
chr1:54803443(-) A-I      intronic
chr1:54803286(-) A-I      intronic
chr1:54803406(-) A-I      intronic
chr1:54720776(-) A-I      intronic
chr1:54803285(-) A-I      intronic
chr1:54698094(-) A-I      intronic
chr1:54812366(-) A-I      intronic
chr1:54847873(-) A-I      intronic
chr1:54813101(-) A-I      intronic
chr1:54783088(-) A-I      intronic
chr1:54812231(-) A-I      intronic
chr1:54737465(-) A-I      intronic
chr1:54813163(-) A-I      intronic
chr1:54779577(-) A-I      intronic
chr1:54859219(-) A-I      intronic
chr1:54811462(-) A-I      intronic
chr1:54700095(-) A-I      intronic
chr1:54742049(-) A-I      intronic
chr1:54720666(-) A-I      intronic
chr1:54700216(-) A-I      intronic
chr1:54698237(-) A-I      intronic
chr1:54709970(-) A-I      intronic
chr1:54721659(-) A-I      intronic
chr1:54821127(-) A-I      intronic
chr1:54811423(-) A-I      intronic
chr1:54777858(-) A-I      intronic
chr1:54781607(-) A-I      intronic
chr1:54848015(-) A-I      intronic
chr1:54781608(-) A-I      intronic
chr1:54701095(-) A-I      intronic
chr1:54847947(-) A-I      intronic
chr1:54700149(-) A-I      intronic
chr1:54748695(-) A-I      intronic
chr1:54781473(-) A-I      intronic
chr1:54721562(-) A-I      intronic
chr1:54803339(-) A-I      intronic
Resource Symbol Editing Position Change SeqReg exReg PMID
DARNED SSBP3
chr1:54698095(-) A-G intron -    22484847
chr1:54700231(-) A-G intron -    22484847
chr1:54700252(-) A-G intron -    22484847
chr1:54700569(-) A-G intron -    22484847
chr1:54720666(-) A-G intron -    22484847
chr1:54720670(-) A-G intron -    22484847
chr1:54720684(-) A-G intron -    22484847
chr1:54720685(-) A-G intron -    22484847
chr1:54721623(-) A-G intron -    22484847
chr1:54721659(-) A-G intron -    22484847
chr1:54721702(-) A-G intron -    22484847
chr1:54778018(-) A-G intron -    22484847
chr1:54783007(-) A-G intron -    22484847
chr1:54783037(-) A-G intron -    22484847
chr1:54783535(-) A-G intron -    22484847
chr1:54783678(-) A-G intron -    22484847
chr1:54786076(-) G-A intron -    22484847
chr1:54803435(-) A-G intron -    22484847
chr1:54803443(-) A-G intron -    22484847
chr1:54812298(-) A-G intron -    22484847
chr1:54812323(-) A-G intron -    22484847
chr1:54812366(-) A-G intron -    22484847
chr1:54812773(-) A-G intron -    22484847
chr1:54812799(-) A-G intron -    22484847
chr1:54812845(-) A-G intron -    22484847
chr1:54812908(-) A-G intron -    22484847
chr1:54812932(-) A-G intron -    22484847
chr1:54816622(-) A-G intron -    22484847
chr1:54816779(-) A-G intron -    22484847
chr1:54817784(-) A-G intron -    22484847
chr1:54833982(-) C-T intron -    22484847
chr1:54847684(-) A-G intron -    22484847
chr1:54859219(-) A-G intron -    22484847
chr1:54859715(-) A-G intron -    22484847

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase SSBP3
chr1:54691119-54691120(-) m6A 3'UTR//exon       27773535
chr1:54691246-54691247(-) m6A 3'UTR//exon       27773535
chr1:54691267-54691268(-) m6A 3'UTR//exon       27773535
chr1:54691398-54691399(-) m6A 3'UTR//exon       24284625//24209618//24981863//27773535
chr1:54691421-54691422(-) m6A 3'UTR//exon       24284625//24209618//24981863//27773535//22608085
chr1:54691499-54691500(-) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085
chr1:54691538-54691539(-) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//27773535//27371828//22608085
chr1:54691552-54691553(-) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//27773535//27371828//22608085
chr1:54691581-54691582(-) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//27773535//27371828
chr1:54691594-54691595(-) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//27773535//27371828
chr1:54691751-54691752(-) m6A 3'UTR//exon       24209618//25456834//27371828
chr1:54691759-54691760(-) m6A 3'UTR//exon       24209618//25456834//27371828
chr1:54691903-54691904(-) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//27773535//27371828
chr1:54691923-54691924(-) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//27773535//27371828
chr1:54691961-54691962(-) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//27773535//27371828
chr1:54691997-54691998(-) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//27773535//27371828
chr1:54692032-54692033(-) m6A 3'UTR//exon       24284625//24209618//25456834//27773535//27371828
chr1:54692040-54692041(-) m6A 3'UTR//exon       24284625//24209618//25456834//27773535//27371828
chr1:54692203-54692204(-) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//27773535//22608085
chr1:54692208-54692209(-) m6A 3'UTR//exon       24284625//24209618//24981863//27773535//22608085
chr1:54692313-54692314(-) m6A 3'UTR//exon       24284625//24209618//24981863//27773535//22608085
chr1:54692516-54692517(-) m6A 3'UTR//exon//intron       24981863
chr1:54692581-54692582(-) m6A 3'UTR//exon//intron       24981863//27773535
chr1:54692586-54692587(-) m6A 3'UTR//exon//intron       24981863//27773535
chr1:54692595-54692596(-) m6A 3'UTR//exon//intron       24981863//27773535
chr1:54692612-54692613(-) m6A 3'UTR//exon//intron       24981863//27773535
chr1:54693955-54693956(-) m6A CDS//exon//intron       27773535
chr1:54694130-54694131(-) m6A CDS//exon//intron       27773535
chr1:54706601-54706602(-) m6A CDS//exon//intron       27773535
chr1:54706629-54706630(-) m6A CDS//exon//intron       27773535
chr1:54707866-54707867(-) m6A CDS//exon//intron       27773535
chr1:54708951-54708952(-) m6A CDS//exon//intron       27773535//27371828
chr1:54717328-54717329(-) m6A CDS//exon//intron       27773535
chr1:54717511-54717512(-) m6A CDS//exon       27773535
chr1:54721275-54721276(-) m6A exon//intron       27773535
chr1:54721328-54721329(-) m6A exon//intron       27773535
chr1:54870544-54870545(-) m6A 5'UTR//CDS       24209618//27773535
chr1:54871683-54871684(-) m6A 5'UTR//intron       24209618
chr1:54872064-54872065(-) m6A 5'UTR//intron       24981863

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate SSBP3
Chromatin K562 cells     -
Cytosol Human myelogenous leukemia cell line (K-562)     21613539
Cytosol HCC cell line (HepG2)|K562 cells     -
Exosome Blood     -
Nucleolus K562 cells     -
Nucleoplasm K562 cells     -
Nucleus HCC cell line (HepG2)|HeLa-S3 cells|K562 cells     -

Interaction Network (The top 100 interactions):


Interactor1: hbv-miR-B8-5p
Interactor2: SSBP3

Evidence Support:


Prediction-Evidence miRanda//RNAHybrid
Support Database VmiReg

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