Basic Information:

  VIRBase ID:  

VHID00556069

  Virus:  

Macacine alphaherpesvirus 1 (CeHV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hbv-miR-B8-5p:  MIMAT0031767          RGP1:  NM_001080496     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hbv-miR-B8-5p	RGP1
miRBase Accession/Entrez ID	MIMAT0031767	9827
Organism	Macacine alphaherpesvirus 1 (CeHV-1)	Homo sapiens
Category	miRNA	mRNA
Alias	-	KIAA0258

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	RGP1	chr9:35752084-35752085(+) m6A CDS//exon       24284625 chr9:35752693-35752694(+) m6A CDS//exon       24284625//24209618//24981863//22608085 chr9:35752723-35752724(+) m6A CDS//exon       24284625//24209618//24981863//22608085 chr9:35752732-35752733(+) m6A CDS//exon       24284625//24209618//24981863//22608085 chr9:35752745-35752746(+) m6A CDS//exon       24284625//24209618//24981863//22575960//22608085 chr9:35752750-35752751(+) m6A CDS//exon       24284625//24209618//24981863//22575960//22608085 chr9:35752770-35752771(+) m6A CDS//exon       24284625//24209618//25456834//24981863//22575960//22608085 chr9:35752785-35752786(+) m6A CDS//exon       24284625//24209618//25456834//24981863//22575960//22608085 chr9:35752872-35752873(+) m6A 3'UTR//intron       24284625//24209618//25456834//24981863//22575960//22608085 chr9:35752912-35752913(+) m6A 3'UTR//intron       24284625//24209618//25456834//24981863//22575960//22608085 chr9:35752925-35752926(+) m6A 3'UTR//intron       24284625//24209618//25456834//24981863//22575960//22608085 chr9:35752936-35752937(+) m6A 3'UTR//intron       24284625//24209618//25456834//24981863//22575960//22608085 chr9:35752970-35752971(+) m6A 3'UTR//intron       24284625//24209618//25456834//24981863//22575960//22608085 chr9:35753127-35753128(+) m6A 3'UTR//intron       - chr9:35753212-35753213(+) m6A 3'UTR//intron       24284625//24981863 chr9:35753275-35753276(+) m6A 3'UTR//intron       24284625//24981863 chr9:35753284-35753285(+) m6A 3'UTR//intron       24284625//24981863 chr9:35753703-35753704(+) m6A 3'UTR//intron       - chr9:35753723-35753724(+) m6A 3'UTR//intron       - chr9:35753841-35753842(+) m6A 3'UTR//intron       - chr9:35754025-35754026(+) m6A 3'UTR//exon       - chr9:35754050-35754051(+) m6A 3'UTR//exon       - chr9:35754148-35754149(+) m6A 3'UTR       - chr9:35754308-35754309(+) m6A 3'UTR       - chr9:35754464-35754465(+) m6A 3'UTR       - chr9:35755842-35755843(+) m6A 3'UTR       - chr9:35755858-35755859(+) m6A 3'UTR       - chr9:35755908-35755909(+) m6A 3'UTR       - chr9:35755963-35755964(+) m6A 3'UTR       24981863 chr9:35756311-35756312(+) m6A 3'UTR       24284625 chr9:35756368-35756369(+) m6A 3'UTR       24284625//25456834//24981863//22608085 chr9:35756395-35756396(+) m6A 3'UTR       24284625//25456834//24981863//22608085 chr9:35756425-35756426(+) m6A 3'UTR       25456834//24981863//22608085 chr9:35756448-35756449(+) m6A 3'UTR       25456834//24981863//22608085 chr9:35756487-35756488(+) m6A 3'UTR       25456834//24981863//22608085 chr9:35756659-35756660(+) m6A 3'UTR       24284625//24209618 chr9:35756821-35756822(+) m6A 3'UTR       24209618//24981863 chr9:35756992-35756993(+) m6A 3'UTR       24284625//24209618 chr9:35757075-35757076(+) m6A 3'UTR       24209618 chr9:35757084-35757085(+) m6A 3'UTR       24209618 chr9:35757340-35757341(+) m6A 3'UTR       24284625//24209618//25456834 chr9:35757347-35757348(+) m6A 3'UTR       24284625//24209618//25456834//24981863 chr9:35757395-35757396(+) m6A 3'UTR       24284625//24209618//25456834//24981863 chr9:35757415-35757416(+) m6A 3'UTR       24284625//24209618//25456834//24981863 chr9:35757448-35757449(+) m6A 3'UTR       24284625//24209618//25456834//24981863 chr9:35757546-35757547(+) m6A 3'UTR       24284625//24209618//25456834//24981863//22608085 chr9:35757554-35757555(+) m6A 3'UTR       24284625//24209618//25456834//24981863//22608085 chr9:35757575-35757576(+) m6A 3'UTR       24284625//24209618//25456834//24981863//22608085 chr9:35757608-35757609(+) m6A 3'UTR       24284625//24209618//25456834//24981863//22608085 chr9:35757644-35757645(+) m6A 3'UTR       24284625//24209618//25456834//24981863

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	RGP1	Chromatin K562 cells     - Cytosol Human myelogenous leukemia cell line (K-562)     21613539 Exosome Blood     - Nucleolus K562 cells     - Nucleoplasm K562 cells     - Nucleus HeLa-S3 cells     -

Interaction Network (The top 100 interactions):

Interactor1: hbv-miR-B8-5p
Interactor2: RGP1

Evidence Support:

Prediction-Evidence	miRanda//RNAHybrid
Support Database	VmiReg