Basic Information:

  VIRBase ID:  

VHID00555841

  Virus:  

Macacine alphaherpesvirus 1 (CeHV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hbv-miR-B8-5p:  MIMAT0031767          HGS:  NM_004712     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hbv-miR-B8-5p	HGS
miRBase Accession/Entrez ID	MIMAT0031767	9146
Organism	Macacine alphaherpesvirus 1 (CeHV-1)	Homo sapiens
Category	miRNA	mRNA
Alias	-	HRS

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	HGS	chr17:79666617(+) A-I      intronic chr17:79666630(+) A-I      intronic chr17:79666645(+) A-I      intronic chr17:79666621(+) A-I      intronic chr17:79666656(+) A-I      intronic chr17:79665365(+) A-I      intronic chr17:79665341(+) A-I      intronic chr17:79665429(+) A-I      intronic chr17:79665075(+) A-I      intronic chr17:79666847(+) A-I      intronic chr17:79666985(+) A-I      intronic chr17:79666731(+) A-I      intronic chr17:79666661(+) A-I      intronic chr17:79666549(+) A-I      intronic chr17:79665345(+) A-I      intronic chr17:79666946(+) A-I      intronic chr17:79666481(+) A-I      intronic chr17:79667057(+) A-I      intronic chr17:79666921(+) A-I      intronic chr17:79665417(+) A-I      intronic chr17:79665008(+) A-I      intronic chr17:79665047(+) A-I      intronic chr17:79667109(+) A-I      intronic chr17:79653100(+) A-I      intronic chr17:79666047(+) A-I      intronic chr17:79666850(+) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	HGS	chr17:79665341(+) A-I intron -    15545495 chr17:79665345(+) A-I intron -    15545495 chr17:79665365(+) A-I intron -    15545495

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	HGS	chr17:79650641-79650642(+) m6A 5'UTR       24284625//24981863 chr17:79651227-79651228(+) m6A 5'UTR//intron       22575960 chr17:79653388-79653389(+) m6A 5'UTR//CDS//exon       24284625//24981863 chr17:79654054-79654055(+) m6A CDS//exon       24284625//24981863//26404942 chr17:79654065-79654066(+) m6A CDS//exon       24284625//24981863//26404942 chr17:79654095-79654096(+) m6A CDS//exon       24284625//24981863//26404942 chr17:79654114-79654115(+) m6A CDS//exon       24284625//24981863//26404942 chr17:79654124-79654125(+) Gm CDS//exon       - chr17:79655735-79655736(+) m6A CDS//exon//intron       24284625//24981863 chr17:79655830-79655831(+) m6A CDS//exon       24284625//22575960 chr17:79655847-79655848(+) Am CDS//exon       - chr17:79657710-79657711(+) m6A CDS//exon       24209618 chr17:79657810-79657811(+) m6A exon//intron       24209618 chr17:79658597-79658598(+) m6A CDS//exon       24284625 chr17:79658694-79658695(+) m6A exon//intron       24284625 chr17:79658704-79658705(+) m6A exon//intron       24284625 chr17:79660030-79660031(+) m6A exon//intron       - chr17:79660901-79660902(+) m6A CDS//exon       24284625//24981863//22575960 chr17:79661869-79661870(+) m6A CDS//exon       24284625//22575960 chr17:79661975-79661976(+) m6A CDS//exon       22575960 chr17:79662208-79662209(+) m6A CDS//exon       - chr17:79663407-79663408(+) m6A CDS//exon       - chr17:79663600-79663601(+) m6A exon//intron       24284625//24209618//22575960 chr17:79663820-79663821(+) m6A exon//intron       24284625 chr17:79663900-79663901(+) m6A CDS//exon//intron       - chr17:79664050-79664051(+) m6A exon//intron       27773535 chr17:79664273-79664274(+) m6A exon//intron       24284625//25456834//27371828//27773536//22608085 chr17:79664327-79664328(+) m6A exon//intron       24284625//25456834//27371828//27773536//22608085 chr17:79664350-79664351(+) m6A exon//intron       24284625//25456834//27371828//27773536//22608085 chr17:79664477-79664478(+) m6A exon//intron       24284625//25456834//27371828//22608085 chr17:79664686-79664687(+) m6A exon//intron       24284625//22608085 chr17:79667572-79667573(+) m6A CDS//exon//intron       24284625 chr17:79668307-79668308(+) m6A CDS//intron       24284625 chr17:79668318-79668319(+) m6A CDS//intron       24284625 chr17:79668358-79668359(+) m6A CDS//intron       24284625 chr17:79668367-79668368(+) m6A CDS//intron       24284625 chr17:79668876-79668877(+) m6A 3'UTR//intron       24284625//25456834//24981863//27371828//27773536//22575960//22608085 chr17:79668941-79668942(+) m6A 3'UTR//intron       24284625//25456834//24981863//27371828//27773536 chr17:79669870-79669871(+) m6A 3'UTR       24284625 chr17:79669880-79669881(+) m6A 3'UTR       24284625 chr17:79670072-79670073(+) m6A 3'UTR       27773536

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	HGS	Chromatin K562 cells     - Cytosol Human myelogenous leukemia cell line (K-562)     21613539 Cytosol HeLa-S3 cells|K562 cells     - Exosome Blood     - Insoluble cytoplasm K562 cells     - Nucleolus K562 cells     - Nucleoplasm K562 cells     - Nucleus Colon cancer cells     24393600 Nucleus HeLa-S3 cells|K562 cells     - Ribosome HEK-293 cells     22199352

Interaction Network (The top 100 interactions):

Interactor1: hbv-miR-B8-5p
Interactor2: HGS

Evidence Support:

Prediction-Evidence	miRanda//RNAHybrid
Support Database	VmiReg