Detail Information

Basic Information:


  VIRBase ID:  

VHID00555427

  Virus:  

Macacine alphaherpesvirus 1 (CeHV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2381

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hbv-miR-B8-5p:           TSC1:      

      *It may take a few minutes to display results.

Interactor Information:


Interactor1 Interactor2
Symbol hbv-miR-B8-5p TSC1
miRBase
Accession/Entrez ID		 MIMAT0031767 7248
Organism Macacine alphaherpesvirus 1 (CeHV-1) Homo sapiens
Category miRNA mRNA
Alias - LAM//TSC

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR TSC1
chr9:135784527(-) A-I      intronic
chr9:135788593(-) A-I      intronic
chr9:135789043(-) A-I      intronic
chr9:135789101(-) A-I      intronic
chr9:135789321(-) A-I      intronic
chr9:135789333(-) A-I      intronic
chr9:135812828(-) A-I      intronic
chr9:135813353(-) A-I      intronic
chr9:135813354(-) A-I      intronic
chr9:135789506(-) A-I      intronic
chr9:135782988(-) A-I      intronic
chr9:135784384(-) A-I      intronic
chr9:135789514(-) A-I      intronic
chr9:135801632(-) A-I      intronic
chr9:135784394(-) A-I      intronic
chr9:135783468(-) A-I      intronic
chr9:135812587(-) A-I      intronic
chr9:135789879(-) A-I      intronic
chr9:135789874(-) A-I      intronic
chr9:135789867(-) A-I      intronic
chr9:135789865(-) A-I      intronic
chr9:135789864(-) A-I      intronic
chr9:135789863(-) A-I      intronic
chr9:135811692(-) A-I      intronic
chr9:135784053(-) A-I      intronic
chr9:135784440(-) A-I      intronic
chr9:135784448(-) A-I      intronic
chr9:135783374(-) A-I      intronic
chr9:135783046(-) A-I      intronic
chr9:135784364(-) A-I      intronic
chr9:135812827(-) A-I      intronic
chr9:135784352(-) A-I      intronic
chr9:135812586(-) A-I      intronic
chr9:135783119(-) A-I      intronic
chr9:135783005(-) A-I      intronic
chr9:135790478(-) A-I      intronic
chr9:135812747(-) A-I      intronic
chr9:135789971(-) A-I      intronic
chr9:135812665(-) A-I      intronic
chr9:135783379(-) A-I      intronic
chr9:135783271(-) A-I      intronic
chr9:135788570(-) A-I      intronic
chr9:135784048(-) A-I      intronic
chr9:135783319(-) A-I      intronic
chr9:135783053(-) A-I      intronic
chr9:135790344(-) A-I      intronic
chr9:135789091(-) A-I      intronic
chr9:135790345(-) A-I      intronic
chr9:135783882(-) A-I      intronic
chr9:135783945(-) A-I      intronic
chr9:135801615(-) A-I      intronic
chr9:135783014(-) A-I      intronic
chr9:135784509(-) A-I      intronic
chr9:135784568(-) A-I      intronic
chr9:135784365(-) A-I      intronic
chr9:135812648(-) A-I      intronic
chr9:135783090(-) A-I      intronic
chr9:135812730(-) A-I      intronic
chr9:135788424(-) A-I      intronic
chr9:135782944(-) A-I      intronic
chr9:135811768(-) A-I      intronic
chr9:135811774(-) A-I      intronic
chr9:135813367(-) A-I      intronic
chr9:135784077(-) A-I      intronic
chr9:135788535(-) A-I      intronic
chr9:135784054(-) A-I      intronic
chr9:135783055(-) A-I      intronic
chr9:135801587(-) A-I      intronic
chr9:135811640(-) A-I      intronic
chr9:135789046(-) A-I      intronic
chr9:135801717(-) A-I      intronic
chr9:135813240(-) A-I      intronic
chr9:135784430(-) A-I      intronic
chr9:135813399(-) A-I      intronic
chr9:135790497(-) A-I      intronic
chr9:135811731(-) A-I      intronic
chr9:135783277(-) A-I      intronic
chr9:135789475(-) A-I      intronic
chr9:135790000(-) A-I      intronic
chr9:135790684(-) A-I      intronic
chr9:135783349(-) A-I      intronic
chr9:135802323(-) A-I      intronic
chr9:135788419(-) A-I      intronic
chr9:135782973(-) A-I      intronic
chr9:135801633(-) A-I      intronic
chr9:135783460(-) A-I      intronic
chr9:135813275(-) A-I      intronic
chr9:135813277(-) A-I      intronic
chr9:135788614(-) A-I      intronic
Resource Symbol Editing Position Change SeqReg exReg PMID
DARNED TSC1
chr9:135788796(-) A-G intron -    22484847
chr9:135783014(-) A-G intron -    22484847
chr9:135788535(-) A-G intron -    22484847
chr9:135788979(-) A-G intron -    22484847
chr9:135813240(-) A-G intron -    22484847
chr9:135813275(-) A-G intron -    22484847
chr9:135813277(-) A-G intron -    22484847

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase TSC1
chr9:135766762-135766763(-) m6A 3'UTR       27773535//22608085
chr9:135766875-135766876(-) m6A 3'UTR       24284625//24981863//27773535//22608085
chr9:135766935-135766936(-) m6A 3'UTR       24284625//24981863//27773535//22608085
chr9:135766984-135766985(-) m6A 3'UTR       24284625//24209618//24981863//27773535//22575960//22608085
chr9:135767002-135767003(-) m6A 3'UTR       24284625//24209618//24981863//27773535//22575960//22608085
chr9:135767037-135767038(-) m6A 3'UTR       24284625//24209618//24981863//27773535//22575960//22608085
chr9:135767051-135767052(-) m6A 3'UTR       24284625//24209618//24981863//27773535//22575960//22608085
chr9:135767085-135767086(-) m6A 3'UTR       24284625//24209618//24981863//27773535//22575960//22608085
chr9:135767100-135767101(-) m6A 3'UTR       24284625//24209618//24981863//27773535//22575960//22608085
chr9:135767122-135767123(-) m6A 3'UTR       24284625//24209618//24981863//27773535//22575960//22608085
chr9:135767132-135767133(-) m6A 3'UTR       24284625//24209618//24981863//27773535//22575960//22608085
chr9:135767234-135767235(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//22575960//22608085
chr9:135767276-135767277(-) m6A 3'UTR       24284625//24209618//25456834//24981863//28052920//27773535//22575960//22608085
chr9:135767284-135767285(-) m6A 3'UTR       24284625//24209618//25456834//24981863//28052920//27773535//22575960//22608085
chr9:135767301-135767302(-) m6A 3'UTR       24284625//24209618//25456834//24981863//28052920//27773535//22575960//22608085
chr9:135767315-135767316(-) m6A 3'UTR       24284625//24209618//24981863//27773535//22608085
chr9:135767561-135767562(-) m6A 3'UTR       24284625//27773535
chr9:135767620-135767621(-) m6A 3'UTR       24981863//27773535//22608085
chr9:135767637-135767638(-) m6A 3'UTR       24981863//27773535//22608085
chr9:135767793-135767794(-) m6A 3'UTR       24284625//24981863//27773535//22608085
chr9:135767957-135767958(-) m6A 3'UTR       24284625//25456834//24981863//27773535//27371828//22608085
chr9:135767968-135767969(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//27371828//22608085
chr9:135768047-135768048(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//27371828//22608085
chr9:135768068-135768069(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//27371828//22608085
chr9:135768080-135768081(-) m6A 3'UTR       24284625//24209618//24981863//27773535//27371828//22608085
chr9:135768153-135768154(-) m6A 3'UTR       24284625//24209618//24981863//27773535//22608085
chr9:135768183-135768184(-) m6A 3'UTR       24284625//24209618//24981863//27773535//22608085
chr9:135768204-135768205(-) m6A 3'UTR       24284625//24209618//24981863//27773535//22608085
chr9:135768219-135768220(-) m6A 3'UTR       24284625//24209618//24981863//27773535//22608085
chr9:135768281-135768282(-) m6A 3'UTR       24284625//24209618//24981863//27773535//22608085
chr9:135768347-135768348(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//27371828//22608085
chr9:135768354-135768355(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//27371828//22608085
chr9:135768359-135768360(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//27371828//22608085
chr9:135768420-135768421(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//27371828//22608085
chr9:135768436-135768437(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//27371828//22608085
chr9:135768454-135768455(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//27371828//22608085
chr9:135768463-135768464(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//27371828//22608085
chr9:135768558-135768559(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//27371828//22608085
chr9:135768575-135768576(-) m6A 3'UTR       24284625//24981863//27773535//22608085
chr9:135768621-135768622(-) m6A 3'UTR       24284625//27773535
chr9:135768648-135768649(-) m6A 3'UTR       24284625//27773535
chr9:135768728-135768729(-) m6A 3'UTR       24284625//27773535
chr9:135768753-135768754(-) m6A 3'UTR       24284625//24981863//27773535
chr9:135768833-135768834(-) m6A 3'UTR       24284625//24981863//27773535
chr9:135768857-135768858(-) m6A 3'UTR       24284625//24981863//27773535
chr9:135769597-135769598(-) m6A 3'UTR       24981863//27773535
chr9:135769612-135769613(-) m6A 3'UTR       24981863//27773535
chr9:135769682-135769683(-) m6A 3'UTR       27773535
chr9:135770160-135770161(-) m6A 3'UTR       27773535
chr9:135770227-135770228(-) m6A 3'UTR       27773535
chr9:135771305-135771306(-) m6A 3'UTR       24284625//27773535
chr9:135771485-135771486(-) m6A 3'UTR       24284625//24209618//25456834//24981863//28052920//27773535//27371828//22575960//22608085
chr9:135771575-135771576(-) m6A 3'UTR       24284625//24209618//25456834//24981863//28052920//27773535//27371828//22575960//22608085
chr9:135771630-135771631(-) m6A CDS       24284625//24209618//25456834//24981863//28052920//27773535//27371828//22575960//22608085
chr9:135771641-135771642(-) m6A CDS       24284625//24209618//25456834//24981863//28052920//27773535//27371828//22575960//22608085
chr9:135771652-135771653(-) m6A CDS       24284625//24209618//25456834//24981863//28052920//27773535//27371828//27773536//22575960//22608085
chr9:135771669-135771670(-) m6A CDS       24284625//24209618//25456834//24981863//28052920//27773535//27371828//27773536//22575960//22608085
chr9:135771679-135771680(-) m6A CDS       24284625//24209618//25456834//24981863//28052920//27773535//27371828//27773536//22575960//22608085
chr9:135771715-135771716(-) m6A CDS       24284625//24209618//25456834//24981863//28052920//27773535//27371828//27773536//22575960//22608085
chr9:135771745-135771746(-) m6A CDS       24284625//24209618//25456834//24981863//28052920//27773535//27371828//22575960//22608085
chr9:135771756-135771757(-) m6A CDS       24284625//24209618//25456834//24981863//28052920//27773535//27371828//22575960//22608085
chr9:135771761-135771762(-) m6A CDS       24284625//24209618//25456834//24981863//28052920//27773535//27371828//22575960//22608085
chr9:135771966-135771967(-) m6A CDS       24284625//25456834//24981863//27773535//27371828//22575960
chr9:135772058-135772059(-) m6A CDS       24284625//27773535//27371828
chr9:135772064-135772065(-) m6A CDS       24284625//27773535//27371828
chr9:135772614-135772615(-) m6A CDS       24981863//27773535
chr9:135772728-135772729(-) m6A CDS       27773535
chr9:135772820-135772821(-) m6A CDS       27773535//27371828
chr9:135772847-135772848(-) m6A CDS       27773535//27371828
chr9:135772863-135772864(-) m6A CDS       27773535//27371828
chr9:135772889-135772890(-) m6A CDS       27773535
chr9:135772927-135772928(-) m6A CDS       27773535
chr9:135772950-135772951(-) m6A CDS       27773535
chr9:135777038-135777039(-) m6A CDS       27773535//22575960
chr9:135777063-135777064(-) m6A CDS       27773535//27371828
chr9:135777072-135777073(-) m6A CDS       27773535//27371828
chr9:135778042-135778043(-) m6A CDS       27773535//27371828
chr9:135778111-135778112(-) m6A CDS       27773535
chr9:135780970-135780971(-) m6A CDS       25456834//27371828
chr9:135781015-135781016(-) m6A CDS       25456834//27773535//27371828
chr9:135781063-135781064(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//27773536
chr9:135781094-135781095(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//27773536//22608085
chr9:135781121-135781122(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//22608085
chr9:135781232-135781233(-) m6A CDS       24284625//24981863//27773535//22608085
chr9:135781244-135781245(-) m6A CDS       24284625//24981863//27773535//22608085
chr9:135781258-135781259(-) m6A CDS       24284625//24981863//27773535//22608085
chr9:135781297-135781298(-) m6A CDS       24284625//24981863//27773535//22608085
chr9:135781342-135781343(-) m6A CDS       24284625//24981863//27773535//22608085
chr9:135781369-135781370(-) m6A CDS       24284625//24981863//27773535//22608085
chr9:135781409-135781410(-) m6A CDS       24284625//24981863//27773535//22608085
chr9:135781435-135781436(-) m6A CDS       24284625//24981863//27773535//22608085
chr9:135781509-135781510(-) m6A CDS       24981863
chr9:135785723-135785724(-) m6A exon//intron       24981863//27773535
chr9:135785737-135785738(-) m6A exon//intron       24981863//27773535
chr9:135785750-135785751(-) m6A exon//intron       24981863//27773535
chr9:135785766-135785767(-) m6A exon//intron       24981863//27773535
chr9:135785818-135785819(-) m6A exon//intron       24284625//24981863//27773535//22608085
chr9:135786052-135786053(-) m6A CDS//exon       24284625//27773535
chr9:135786064-135786065(-) m6A CDS//exon       24284625//27773535
chr9:135796751-135796752(-) Am CDS//exon       -
chr9:135804306-135804307(-) m6A 5'UTR//exon       -
chr9:135804315-135804316(-) m6A 5'UTR//exon       -
chr9:135806605-135806606(-) m6A exon//intron       27371828
chr9:135806622-135806623(-) m6A exon//intron       27371828
chr9:135806664-135806665(-) m6A exon//intron       -
chr9:135810469-135810470(-) m6A 5'UTR//exon//intron       24981863
chr9:135819953-135819954(-) m6A 5'UTR//exon       24981863
chr9:135819965-135819966(-) m6A 5'UTR//exon       24981863

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate TSC1
Chromatin K562 cells     -
Cytosol Human myelogenous leukemia cell line (K-562)     21613539
Cytosol HCC cell line (HepG2)     -
Exosome Blood     -
Insoluble cytoplasm K562 cells     -
Nucleolus K562 cells     -
Nucleoplasm K562 cells     -
Nucleus HCC cell line (HepG2)|HeLa-S3 cells|K562 cells     -

Interaction Network (The top 100 interactions):


Interactor1: hbv-miR-B8-5p
Interactor2: TSC1

Evidence Support:


Prediction-Evidence miRanda//PITA//Targetscan
Support Database VmiReg

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