Detail Information

Basic Information:


  VIRBase ID:  

VHID00555336

  Virus:  

Macacine alphaherpesvirus 1 (CeHV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2381

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hbv-miR-B8-5p:           TAT:      

      *It may take a few minutes to display results.

Interactor Information:


Interactor1 Interactor2
Symbol hbv-miR-B8-5p TAT
miRBase
Accession/Entrez ID		 MIMAT0031767 6898
Organism Macacine alphaherpesvirus 1 (CeHV-1) Homo sapiens
Category miRNA mRNA
Alias - -

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR TAT
chr16:71601140(-) A-I      3'UTR
chr16:71601109(-) A-I      3'UTR
chr16:71601095(-) A-I      3'UTR
chr16:71601190(-) A-I      3'UTR
chr16:71601203(-) A-I      3'UTR
chr16:71601212(-) A-I      3'UTR
chr16:71601204(-) A-I      3'UTR
chr16:71601055(-) A-I      3'UTR
chr16:71607649(-) A-I      intronic
chr16:71607650(-) A-I      intronic
chr16:71607783(-) A-I      intronic
chr16:71608267(-) A-I      intronic
chr16:71601163(-) A-I      3'UTR
chr16:71601124(-) A-I      3'UTR
chr16:71601068(-) A-I      3'UTR
chr16:71601067(-) A-I      3'UTR
chr16:71601064(-) A-I      3'UTR
chr16:71601164(-) A-I      3'UTR
chr16:71601149(-) A-I      3'UTR
chr16:71601146(-) A-I      3'UTR
chr16:71601211(-) A-I      3'UTR
chr16:71601129(-) A-I      3'UTR
chr16:71607674(-) A-I      intronic

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase TAT
chr16:71599746-71599747(-) m6A 3'UTR       27773535
chr16:71599765-71599766(-) m6A 3'UTR       27773535
chr16:71599780-71599781(-) m6A 3'UTR       27773535
chr16:71599793-71599794(-) m6A 3'UTR       27773535
chr16:71599857-71599858(-) m6A 3'UTR       27773535
chr16:71599911-71599912(-) m6A 3'UTR       27773535
chr16:71599930-71599931(-) m6A 3'UTR       27773535
chr16:71599938-71599939(-) m6A 3'UTR       27773535
chr16:71601641-71601642(-) m6A 3'UTR       27773535
chr16:71601654-71601655(-) m6A 3'UTR       27773535
chr16:71601728-71601729(-) m6A 3'UTR       27773535
chr16:71601754-71601755(-) m6A 3'UTR       27773535
chr16:71601974-71601975(-) m6A 3'UTR//exon       24981863//27773535
chr16:71601998-71601999(-) m6A 3'UTR//exon       24981863//27773535

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate TAT
Cytoplasm Nasopharyngeal carcinoma cells     20498841
Exosome Blood     -
Nucleus Nasopharyngeal carcinoma cells     20498841

Interaction Network (The top 100 interactions):


Interactor1: hbv-miR-B8-5p
Interactor2: TAT

Evidence Support:


Prediction-Evidence miRanda//RNAHybrid//Targetscan
Support Database VmiReg

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