Basic Information:

  VIRBase ID:  

VHID00554714

  Virus:  

Macacine alphaherpesvirus 1 (CeHV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hbv-miR-B8-5p:  MIMAT0031767          NEK2:  NM_002497     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hbv-miR-B8-5p	NEK2
miRBase Accession/Entrez ID	MIMAT0031767	4751
Organism	Macacine alphaherpesvirus 1 (CeHV-1)	Homo sapiens
Category	miRNA	mRNA
Alias	-	HsPK21//NEK2A//NLK1//PPP1R111//RP67

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	NEK2	chr1:211838317(-) A-I      intronic chr1:211847408(-) A-I      intronic chr1:211838319(-) A-I      intronic

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	NEK2	chr1:211833755-211833756(-) m6A intron       - chr1:211833807-211833808(-) m6A intron       - chr1:211833846-211833847(-) m6A intron       - chr1:211836679-211836680(-) Y 3'UTR       25219674 chr1:211836711-211836712(-) m6A 3'UTR//intron       24981863//22608085 chr1:211836754-211836755(-) m6A 3'UTR//exon//intron       24284625//24981863//22608085 chr1:211836788-211836789(-) m6A CDS//exon//intron       24284625//24981863//22608085 chr1:211839793-211839794(-) m6A 3'UTR//intron       27773535 chr1:211839825-211839826(-) m6A 3'UTR//intron       27773535 chr1:211840497-211840498(-) m6A CDS//exon       28052920//27371828//22608085 chr1:211840530-211840531(-) m6A CDS//exon       24981863//28052920//27371828//22608085 chr1:211840541-211840542(-) m6A CDS//exon       24981863//28052920//27371828//22608085 chr1:211840565-211840566(-) m6A CDS//exon       24981863//28052920//27371828//22608085 chr1:211842518-211842519(-) m6A CDS//exon       24981863//27371828 chr1:211842636-211842637(-) m6A CDS//exon       - chr1:211842849-211842850(-) m6A exon//intron       27773535 chr1:211842856-211842857(-) m6A exon//intron       27773535 chr1:211843629-211843630(-) m6A CDS//exon       27773535 chr1:211847719-211847720(-) m6A CDS       27773535//27371828 chr1:211847754-211847755(-) m6A CDS       27773535//27371828 chr1:211847762-211847763(-) m6A CDS       27773535//27371828 chr1:211847768-211847769(-) m6A CDS       27773535//27371828 chr1:211847804-211847805(-) m6A CDS       27773535//27371828 chr1:211847837-211847838(-) m6A CDS       27773535//27371828 chr1:211848801-211848802(-) m6A CDS       27371828//27773536//22575960

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	NEK2	Cytosol Human myelogenous leukemia cell line (K-562)     21613539 Exosome Blood     - Nucleoplasm K562 cells     - Nucleus HeLa-S3 cells|K562 cells     - Ribosome HEK-293 cells     22199352 Ribosome Colon cancer cells     24393600

Interaction Network (The top 100 interactions):

Interactor1: hbv-miR-B8-5p
Interactor2: NEK2

Evidence Support:

Prediction-Evidence	PITA//RNAHybrid
Support Database	VmiReg