Detail Information

Basic Information:


  VIRBase ID:  

VHID00552883

  Virus:  

Macacine alphaherpesvirus 1 (CeHV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2381

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hbv-miR-B7-5p:           LDHD:      

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Interactor Information:


Interactor1 Interactor2
Symbol hbv-miR-B7-5p LDHD
miRBase
Accession/Entrez ID
MIMAT0031766 197257
Organism Macacine alphaherpesvirus 1 (CeHV-1) Homo sapiens
Category miRNA mRNA
Alias - DLACD//DLD

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase LDHD
chr16:75145865-75145866(-) m6A 3'UTR       24284625//25456834//24981863
chr16:75145893-75145894(-) m6A 3'UTR       24284625//25456834//24981863
chr16:75145941-75145942(-) m6A 3'UTR       24284625//25456834//24981863
chr16:75146198-75146199(-) m6A 3'UTR       24284625
chr16:75146290-75146291(-) m6A CDS       24284625
chr16:75146318-75146319(-) m6A CDS       24284625
chr16:75146510-75146511(-) m6A CDS       24284625//27773536
chr16:75146537-75146538(-) m6A CDS       24284625//27773536
chr16:75146738-75146739(-) m6A CDS       -
chr16:75148807-75148808(-) m6A 3'UTR//CDS//exon       -
chr16:75148816-75148817(-) m6A 3'UTR//CDS//exon       -
chr16:75148834-75148835(-) m6A 3'UTR//CDS//exon       -

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate LDHD
Exosome Blood     -

Interaction Network (The top 100 interactions):


Interactor1: hbv-miR-B7-5p
Interactor2: LDHD

Evidence Support:


Prediction-Evidence miRanda//RNAHybrid//Targetscan
Support Database VmiReg

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