Basic Information:

  VIRBase ID:  

VHID00552577

  Virus:  

Macacine alphaherpesvirus 1 (CeHV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hbv-miR-B7-5p:  MIMAT0031766          C1orf131:  NM_001300830     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hbv-miR-B7-5p	C1orf131
miRBase Accession/Entrez ID	MIMAT0031766	128061
Organism	Macacine alphaherpesvirus 1 (CeHV-1)	Homo sapiens
Category	miRNA	mRNA
Alias	-	-

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	C1orf131	chr1:231371515(-) A-I      intronic chr1:231371191(-) A-I      intronic chr1:231371183(-) A-I      intronic chr1:231371543(-) A-I      intronic chr1:231371535(-) A-I      intronic chr1:231363156(-) A-I      intronic chr1:231363158(-) A-I      intronic chr1:231363616(-) A-I      intronic chr1:231363296(-) A-I      intronic chr1:231369463(-) A-I      intronic chr1:231363146(-) A-I      intronic chr1:231361484(-) A-I      intronic chr1:231369396(-) A-I      intronic chr1:231363271(-) A-I      intronic chr1:231361530(-) A-I      intronic chr1:231369395(-) A-I      intronic chr1:231364262(-) A-I      intronic chr1:231363607(-) A-I      intronic chr1:231363040(-) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	C1orf131	chr1:231372793(-) A-I intron -    15342557   //15258596 chr1:231372829(-) A-I intron -    15342557   //15258596 chr1:231372833(-) A-I intron -    15342557   //15258596 chr1:231372856(-) A-I intron -    15342557   //15258596 chr1:231372879(-) A-I intron -    15342557   //15258596 chr1:231373852(-) A-I intron -    15342557   //15258596

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	C1orf131	chr1:231359889-231359890(-) m6A 3'UTR       24981863 chr1:231359919-231359920(-) m6A 3'UTR       24981863//27773535//22608085 chr1:231359947-231359948(-) Tm 3'UTR       - chr1:231359965-231359966(-) m6A 3'UTR       24284625//24981863//26404942//27773535//27371828//22608085 chr1:231359993-231359994(-) m6A 3'UTR       24284625//24981863//27773535//27371828//22608085 chr1:231360083-231360084(-) m6A 3'UTR//CDS//exon       24284625//24981863//27773535//27371828//22608085 chr1:231360108-231360109(-) m6A 3'UTR//CDS//exon       24284625//24981863//27773535//27371828//22608085 chr1:231360243-231360244(-) m6A 3'UTR//intron       24981863//27773535//22608085 chr1:231360410-231360411(-) m6A 3'UTR//intron       27773535 chr1:231360415-231360416(-) m6A 3'UTR//intron       27773535 chr1:231360473-231360474(-) m6A 3'UTR//intron       27773535 chr1:231361172-231361173(-) m6A 3'UTR//intron       24981863//22608085 chr1:231361185-231361186(-) m6A 3'UTR//intron       24981863//27773535//22608085 chr1:231361219-231361220(-) m6A CDS//exon       24981863//27773535//22608085 chr1:231361227-231361228(-) m6A CDS//exon       24981863//27773535//22608085 chr1:231361259-231361260(-) m6A CDS//exon       24981863//27773535//22608085 chr1:231361338-231361339(-) m6A exon//intron       24981863//27773535//22608085 chr1:231362487-231362488(-) m6A CDS//exon       24981863//27773535//22608085 chr1:231362748-231362749(-) m6A CDS//exon       24981863//27773535//22608085 chr1:231372473-231372474(-) m6A exon//intron       27773535 chr1:231374528-231374529(-) m6A exon//intron       22608085 chr1:231374567-231374568(-) m6A exon//intron       27773535//22608085 chr1:231374609-231374610(-) m6A CDS//exon       24981863//27773535//22608085 chr1:231374674-231374675(-) m6A CDS//exon       24284625//24981863//27773535//22608085 chr1:231374684-231374685(-) m6A CDS//exon       24284625//24981863//27773535//22608085 chr1:231374728-231374729(-) m6A CDS//exon       24284625//24981863//27773535//22608085 chr1:231374739-231374740(-) m6A CDS//exon       24981863//27773535//22608085 chr1:231374773-231374774(-) m6A CDS//exon       24981863//27773535//22608085 chr1:231374882-231374883(-) m6A CDS//exon       27773535//27371828//27773536 chr1:231374911-231374912(-) m6A CDS//exon       27773535//27371828//27773536 chr1:231374916-231374917(-) m6A CDS//exon       27773535//27371828//27773536 chr1:231376783-231376784(-) m6A CDS//exon       24981863//27773535//27371828//27773536 chr1:231376915-231376916(-) m6A 5'UTR//exon       24284625//24981863//27371828//27773536

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	C1orf131	Chromatin K562 cells     - Cytosol K562 cells     - Exosome Blood     - Insoluble cytoplasm HCC cell line (HepG2)|K562 cells     - Membrane HCC cell line (HepG2)     - Nucleolus K562 cells     - Nucleus HeLa-S3 cells     - Ribosome Colon cancer cells     24393600

Interaction Network (The top 100 interactions):

Interactor1: hbv-miR-B7-5p
Interactor2: C1orf131

Evidence Support:

Prediction-Evidence	miRanda//PITA
Support Database	VmiReg