Basic Information:

  VIRBase ID:  

VHID00551272

  Virus:  

Macacine alphaherpesvirus 1 (CeHV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2455

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hbv-miR-B7-5p:  MIMAT0031766          TMEM140:  NM_018295     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hbv-miR-B7-5p	TMEM140
miRBase Accession/Entrez ID	MIMAT0031766	55281
Organism	Macacine alphaherpesvirus 1 (CeHV-1)	Homo sapiens
Category	miRNA	mRNA
Alias	-	-

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	TMEM140	chr7:134850600(+) A-I      3'UTR chr7:134850606(+) A-I      3'UTR chr7:134850608(+) A-I      3'UTR chr7:134850565(+) A-I      3'UTR

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	TMEM140	chr7:134832875-134832876(+) m6A 5'UTR       24981863 chr7:134832955-134832956(+) m6A 5'UTR//exon       24981863 chr7:134837870-134837871(+) m6A exon//intron       24284625//25456834//24981863//22608085 chr7:134849365-134849366(+) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//27773536//22608085 chr7:134849858-134849859(+) m6A 3'UTR       24284625//24981863//26404942 chr7:134849963-134849964(+) m6A 3'UTR       24284625//24981863//27773535//22575960 chr7:134849982-134849983(+) m6A 3'UTR       24284625//24981863//27773535//22575960 chr7:134849991-134849992(+) m6A 3'UTR       24284625//24981863//27773535//22575960 chr7:134850100-134850101(+) m6A 3'UTR       24981863//27773535 chr7:134850134-134850135(+) m6A 3'UTR       24981863//27773535 chr7:134850146-134850147(+) m6A 3'UTR       24981863//27773535//22575960 chr7:134850166-134850167(+) m6A 3'UTR       24981863//27773535//22575960 chr7:134850201-134850202(+) m6A 3'UTR       24981863//27773535//22575960 chr7:134850265-134850266(+) m6A 3'UTR       24981863//27773535//22575960 chr7:134850313-134850314(+) m6A 3'UTR       24981863//27773535//22575960 chr7:134850318-134850319(+) m6A 3'UTR       24981863//27773535//22575960 chr7:134850335-134850336(+) m6A 3'UTR       24981863//27773535//22575960 chr7:134850366-134850367(+) m6A 3'UTR       24981863//22575960 chr7:134850378-134850379(+) m6A 3'UTR       24981863//22575960 chr7:134850420-134850421(+) m6A 3'UTR       24981863//22575960 chr7:134850430-134850431(+) m6A 3'UTR       24981863//22575960 chr7:134850450-134850451(+) m6A 3'UTR       24981863//22575960 chr7:134850455-134850456(+) m6A 3'UTR       24981863//22575960 chr7:134850474-134850475(+) m6A 3'UTR       24981863//22575960 chr7:134850508-134850509(+) m6A 3'UTR       24981863//27773535//22575960//22608085 chr7:134850518-134850519(+) m6A 3'UTR       24981863//27773535//22575960//22608085 chr7:134850580-134850581(+) m6A 3'UTR       24284625//24209618//25456834//24981863//28052920//27773535//27371828//22608085 chr7:134850632-134850633(+) m6A 3'UTR       24284625//24209618//25456834//24981863//28052920//27773535//27371828//22575960//22608085 chr7:134850644-134850645(+) m6A 3'UTR       24284625//24209618//25456834//24981863//28052920//27773535//27371828//22575960//22608085 chr7:134850726-134850727(+) m6A 3'UTR       24284625//24209618//25456834//24981863//28052920//27773535//27371828//22575960//22608085 chr7:134850815-134850816(+) m6A 3'UTR       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//22575960//22608085 chr7:134850827-134850828(+) m6A 3'UTR       24284625//24209618//25456834//24981863//28052920//27773535//27371828//22575960//22608085 chr7:134850885-134850886(+) m6A 3'UTR       24284625//24209618//25456834//24981863//28052920//26404942//27773535//22575960//22608085 chr7:134850898-134850899(+) m6A 3'UTR       24284625//24209618//25456834//24981863//28052920//26404942//27773535//22575960//22608085 chr7:134850910-134850911(+) m6A 3'UTR       24284625//24209618//25456834//24981863//28052920//26404942//27773535//22608085 chr7:134850942-134850943(+) m6A 3'UTR       24284625//24209618//25456834//28052920//26404942//27773535//22608085 chr7:134850947-134850948(+) m6A 3'UTR       24284625//24209618//25456834//28052920//26404942//27773535//22608085

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	TMEM140	Chromatin K562 cells     - Exosome Blood     - Nucleoplasm K562 cells     - Nucleus HCC cell line (HepG2)|K562 cells     -

Interaction Network (The top 100 interactions):

Interactor1: hbv-miR-B7-5p
Interactor2: TMEM140

Evidence Support:

Prediction-Evidence	miRanda//PITA//RNAHybrid//Targetscan
Support Database	VmiReg