Basic Information:

  VIRBase ID:  

VHID00550556

  Virus:  

Macacine alphaherpesvirus 1 (CeHV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hbv-miR-B7-5p:  MIMAT0031766          PACS2:  NM_015197     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hbv-miR-B7-5p	PACS2
miRBase Accession/Entrez ID	MIMAT0031766	23241
Organism	Macacine alphaherpesvirus 1 (CeHV-1)	Homo sapiens
Category	miRNA	mRNA
Alias	-	DEE66//EIEE66//PACS-2//PACS1L

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	PACS2	chr14:105825745(+) A-I      intronic chr14:105860027(+) A-I      intronic chr14:105860001(+) A-I      intronic chr14:105810102(+) A-I      intronic chr14:105811490(+) A-I      intronic chr14:105826835(+) A-I      intronic chr14:105826724(+) A-I      intronic chr14:105860325(+) A-I      intronic chr14:105825998(+) A-I      intronic chr14:105825992(+) A-I      intronic chr14:105820333(+) A-I      intronic chr14:105787240(+) A-I      intronic chr14:105825784(+) A-I      intronic chr14:105820031(+) A-I      intronic chr14:105811658(+) A-I      intronic chr14:105784920(+) A-I      intronic chr14:105810705(+) A-I      intronic chr14:105810689(+) A-I      intronic chr14:105810305(+) A-I      intronic chr14:105820407(+) A-I      intronic chr14:105810088(+) A-I      intronic chr14:105810072(+) A-I      intronic chr14:105806378(+) A-I      intronic chr14:105806350(+) A-I      intronic chr14:105860020(+) A-I      intronic chr14:105773443(+) A-I      intronic chr14:105786419(+) A-I      intronic chr14:105805868(+) A-I      intronic chr14:105773467(+) A-I      intronic chr14:105787370(+) A-I      intronic chr14:105826677(+) A-I      intronic chr14:105859983(+) A-I      intronic chr14:105787829(+) A-I      intronic chr14:105773509(+) A-I      intronic chr14:105805723(+) A-I      intronic chr14:105810081(+) A-I      intronic chr14:105805693(+) A-I      intronic chr14:105787383(+) A-I      intronic chr14:105805692(+) A-I      intronic chr14:105808679(+) A-I      intronic chr14:105837048(+) A-I      intronic chr14:105826734(+) A-I      intronic chr14:105787393(+) A-I      intronic chr14:105787812(+) A-I      intronic chr14:105787817(+) A-I      intronic chr14:105805667(+) A-I      intronic chr14:105768641(+) A-I      intronic chr14:105820011(+) A-I      intronic chr14:105836817(+) A-I      intronic chr14:105787938(+) A-I      intronic chr14:105787935(+) A-I      intronic chr14:105787849(+) A-I      intronic chr14:105805912(+) A-I      intronic chr14:105825714(+) A-I      intronic chr14:105837159(+) A-I      intronic chr14:105786524(+) A-I      intronic chr14:105808717(+) A-I      intronic chr14:105768946(+) A-I      intronic chr14:105805629(+) A-I      intronic chr14:105860309(+) A-I      intronic chr14:105841717(+) A-I      intronic chr14:105859949(+) A-I      intronic chr14:105841614(+) A-I      intronic chr14:105841613(+) A-I      intronic chr14:105820294(+) A-I      intronic chr14:105837158(+) A-I      intronic chr14:105773076(+) A-I      intronic chr14:105841606(+) A-I      intronic chr14:105841561(+) A-I      intronic chr14:105837157(+) A-I      intronic chr14:105836825(+) A-I      intronic chr14:105836795(+) A-I      intronic chr14:105808684(+) A-I      intronic chr14:105787234(+) A-I      intronic chr14:105828179(+) A-I      intronic chr14:105786384(+) A-I      intronic chr14:105828165(+) A-I      intronic chr14:105828032(+) A-I      intronic chr14:105841562(+) A-I      intronic chr14:105820293(+) A-I      intronic chr14:105826721(+) A-I      intronic chr14:105819960(+) A-I      intronic chr14:105836800(+) A-I      intronic chr14:105806325(+) A-I      intronic chr14:105831206(+) A-I      intronic chr14:105768278(+) A-I      intronic chr14:105836956(+) A-I      intronic chr14:105826773(+) A-I      intronic chr14:105768397(+) A-I      intronic chr14:105820203(+) A-I      intronic chr14:105787359(+) A-I      intronic chr14:105826690(+) A-I      intronic chr14:105841555(+) A-I      intronic chr14:105826801(+) A-I      intronic chr14:105826760(+) A-I      intronic chr14:105811633(+) A-I      intronic chr14:105810133(+) A-I      intronic chr14:105841628(+) A-I      intronic chr14:105787839(+) A-I      intronic chr14:105805936(+) A-I      intronic chr14:105839118(+) A-I      intronic chr14:105810488(+) A-I      intronic chr14:105828313(+) A-I      intronic chr14:105860296(+) A-I      intronic chr14:105831146(+) A-I      intronic chr14:105786863(+) A-I      intronic chr14:105832432(+) A-I      intronic chr14:105831198(+) A-I      intronic chr14:105787304(+) A-I      intronic chr14:105837180(+) A-I      intronic chr14:105836843(+) A-I      intronic chr14:105826716(+) A-I      intronic chr14:105860287(+) A-I      intronic chr14:105810459(+) A-I      intronic chr14:105836816(+) A-I      intronic chr14:105797802(+) A-I      intronic chr14:105825880(+) A-I      intronic chr14:105787900(+) A-I      intronic chr14:105860363(+) A-I      intronic chr14:105787338(+) A-I      intronic chr14:105768967(+) A-I      intronic chr14:105787339(+) A-I      intronic chr14:105806255(+) A-I      intronic chr14:105769787(+) A-I      intronic chr14:105860320(+) A-I      intronic chr14:105826662(+) A-I      intronic chr14:105810427(+) A-I      intronic chr14:105841694(+) A-I      intronic chr14:105805697(+) A-I      intronic chr14:105825749(+) A-I      intronic chr14:105860295(+) A-I      intronic chr14:105787235(+) A-I      intronic chr14:105826905(+) A-I      intronic chr14:105838990(+) A-I      intronic chr14:105811326(+) A-I      intronic chr14:105770565(+) A-I      intronic chr14:105805663(+) A-I      intronic chr14:105841363(+) A-I      intronic chr14:105826731(+) A-I      intronic chr14:105826761(+) A-I      intronic chr14:105826622(+) A-I      intronic chr14:105825731(+) A-I      intronic chr14:105825725(+) A-I      intronic chr14:105787303(+) A-I      intronic chr14:105826800(+) A-I      intronic chr14:105837064(+) A-I      intronic chr14:105811590(+) A-I      intronic chr14:105837171(+) A-I      intronic chr14:105831303(+) A-I      intronic chr14:105805755(+) A-I      intronic chr14:105810132(+) A-I      intronic chr14:105854906(+) A-I      intronic chr14:105811623(+) A-I      intronic chr14:105786942(+) A-I      intronic chr14:105823852(+) A-I      intronic chr14:105820070(+) A-I      intronic chr14:105787337(+) A-I      intronic chr14:105832523(+) A-I      intronic chr14:105787228(+) A-I      intronic chr14:105832520(+) A-I      intronic chr14:105768658(+) A-I      intronic chr14:105826678(+) A-I      intronic chr14:105826667(+) A-I      intronic chr14:105836778(+) A-I      intronic chr14:105773043(+) A-I      intronic chr14:105825834(+) A-I      intronic chr14:105820118(+) A-I      intronic chr14:105806281(+) A-I      intronic chr14:105831287(+) A-I      intronic chr14:105811489(+) A-I      intronic chr14:105809193(+) A-I      intronic chr14:105811325(+) A-I      intronic chr14:105826868(+) A-I      intronic chr14:105808632(+) A-I      intronic chr14:105787857(+) A-I      intronic chr14:105805679(+) A-I      intronic chr14:105826715(+) A-I      intronic chr14:105787270(+) A-I      intronic chr14:105809112(+) A-I      intronic chr14:105806299(+) A-I      intronic chr14:105832431(+) A-I      intronic chr14:105810338(+) A-I      intronic chr14:105836794(+) A-I      intronic chr14:105863083(+) A-I      3'UTR

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	PACS2	chr14:105839118(+) A-I intron -    22327324 chr14:105836778(+) A-I intron -    21960545 chr14:105837158(+) A-I intron -    21960545 chr14:105863086(+) C-T intron -    21725310 chr14:105805667(+) A-G intron -    22484847 chr14:105826690(+) A-G intron -    22484847 chr14:105836778(+) A-G intron -    22484847 chr14:105837171(+) A-G intron -    22484847 chr14:105839118(+) A-G intron -    22484847

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	PACS2	chr14:105767004-105767005(+) m6A 5'UTR       24209618//27773536 chr14:105767170-105767171(+) m6A 5'UTR       27773536 chr14:105767182-105767183(+) m6A 5'UTR       27773536 chr14:105767202-105767203(+) m6A 5'UTR       24981863//27773536 chr14:105767297-105767298(+) m6A 5'UTR       24981863//27773536 chr14:105780756-105780757(+) m6A 5'UTR//intron       24981863//27773536 chr14:105833673-105833674(+) m6A CDS//exon       - chr14:105836184-105836185(+) m6A CDS//exon       24284625 chr14:105837582-105837583(+) m6A intron       - chr14:105837706-105837707(+) m6A intron       - chr14:105837752-105837753(+) m6A intron       - chr14:105837765-105837766(+) m6A intron       - chr14:105837811-105837812(+) m6A intron       - chr14:105837935-105837936(+) m6A intron       - chr14:105837940-105837941(+) m6A intron       - chr14:105837962-105837963(+) m6A intron       - chr14:105838015-105838016(+) m6A intron       - chr14:105838121-105838122(+) m6A intron       - chr14:105838137-105838138(+) m6A intron       - chr14:105841104-105841105(+) m6A intron       22608085 chr14:105841148-105841149(+) m6A intron       22608085 chr14:105843111-105843112(+) m6A CDS//exon       - chr14:105843123-105843124(+) m6A CDS//exon       - chr14:105843156-105843157(+) m6A CDS//exon       - chr14:105843162-105843163(+) m6A CDS//exon       - chr14:105843183-105843184(+) m6A CDS//exon       22575960 chr14:105846115-105846116(+) Gm CDS//exon       - chr14:105848345-105848346(+) m6A CDS//exon       - chr14:105850725-105850726(+) m6A CDS//exon       - chr14:105850752-105850753(+) m6A CDS//exon       - chr14:105850767-105850768(+) m6A CDS//exon       - chr14:105851221-105851222(+) m6A CDS//exon       - chr14:105851230-105851231(+) m6A CDS//exon       - chr14:105855065-105855066(+) m6A exon//intron       25456834 chr14:105855086-105855087(+) m6A exon//intron       25456834 chr14:105855109-105855110(+) m6A exon//intron       25456834 chr14:105855118-105855119(+) m6A exon//intron       25456834 chr14:105855262-105855263(+) m6A exon//intron       25456834 chr14:105855451-105855452(+) m6A exon//intron       25456834 chr14:105855459-105855460(+) m6A exon//intron       25456834 chr14:105855495-105855496(+) m6A exon//intron       25456834 chr14:105855572-105855573(+) m6A exon//intron       25456834//22608085 chr14:105855631-105855632(+) m6A exon//intron       25456834//22608085 chr14:105855726-105855727(+) m6A exon//intron       25456834//22608085 chr14:105855799-105855800(+) m6A exon//intron       25456834 chr14:105855940-105855941(+) m6A exon//intron       25456834 chr14:105856047-105856048(+) m6A exon//intron       25456834 chr14:105856150-105856151(+) m6A exon//intron       25456834 chr14:105858993-105858994(+) m6A CDS//exon//intron       - chr14:105859020-105859021(+) m6A CDS//exon//intron       - chr14:105859047-105859048(+) m6A CDS//exon//intron       - chr14:105859065-105859066(+) m6A CDS//exon//intron       - chr14:105860987-105860988(+) m6A CDS//exon       24284625//24209618//24981863//22575960//22608085 chr14:105861094-105861095(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//26404942//27773535//22575960//22608085 chr14:105861107-105861108(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//26404942//27773535//22575960//22608085 chr14:105861119-105861120(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//26404942//27773535//22575960//22608085 chr14:105861154-105861155(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//26404942//27773535//22575960//22608085 chr14:105861348-105861349(+) m6A 3'UTR//exon       24284625//25456834//24981863//22575960//22608085 chr14:105861513-105861514(+) m6A 3'UTR//exon       24284625

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	PACS2	Chromatin K562 cells     - Cytoplasm Nasopharyngeal carcinoma cells     20498841 Cytoplasm Nasopharyngeal carcinoma cells     20498841 Cytosol Human myelogenous leukemia cell line (K-562)     21613539 Cytosol K562 cells     - Exosome Blood     - Nucleolus K562 cells     - Nucleoplasm K562 cells     - Nucleus Nasopharyngeal carcinoma cells     20498841 Nucleus Nasopharyngeal carcinoma cells     20498841 Nucleus HCC cell line (HepG2)|K562 cells     -

Interaction Network (The top 100 interactions):

Interactor1: hbv-miR-B7-5p
Interactor2: PACS2

Evidence Support:

Prediction-Evidence	miRanda//Targetscan
Support Database	VmiReg