Detail Information

Basic Information:


  VIRBase ID:  

VHID00550244

  Virus:  

Macacine alphaherpesvirus 1 (CeHV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hbv-miR-B7-5p:           RBM14:      

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Interactor Information:


Interactor1 Interactor2
Symbol hbv-miR-B7-5p RBM14
miRBase
Accession/Entrez ID
MIMAT0031766 10432
Organism Macacine alphaherpesvirus 1 (CeHV-1) Homo sapiens
Category miRNA mRNA
Alias - COAA//PSP2//SIP//SYTIP1//TMEM137

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR RBM14
chr11:66389486(+) A-I      intronic
chr11:66397338(+) A-I      3'UTR
chr11:66397387(+) A-I      3'UTR
chr11:66389846(+) A-I      intronic
chr11:66389834(+) A-I      intronic
chr11:66389894(+) A-I      intronic
chr11:66397362(+) A-I      3'UTR
chr11:66397364(+) A-I      3'UTR
chr11:66397319(+) A-I      3'UTR
chr11:66396911(+) A-I      3'UTR
chr11:66397372(+) A-I      3'UTR
chr11:66397370(+) A-I      3'UTR
chr11:66397320(+) A-I      3'UTR
chr11:66397278(+) A-I      3'UTR
chr11:66397285(+) A-I      3'UTR

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase RBM14
chr11:66384113-66384114(+) m6A 5'UTR//exon       24284625//24209618//25456834//24981863//22575960//22608085
chr11:66384295-66384296(+) m6A CDS//exon       24284625//24209618//25456834//24981863//22575960//22608085
chr11:66384472-66384473(+) m6A CDS//exon       24284625//24209618//22575960//22608085
chr11:66384707-66384708(+) m6A exon//intron       24284625//24209618//22608085
chr11:66391781-66391782(+) m6A 3'UTR//CDS//exon//intron       24284625//24209618//25456834//24981863//26404942//22575960//22608085
chr11:66391834-66391835(+) m6A 3'UTR//CDS//exon//intron       24284625//24209618//25456834//24981863//26404942//22575960//22608085
chr11:66391839-66391840(+) m6A 3'UTR//CDS//exon//intron       24284625//24209618//25456834//24981863//26404942//22575960//22608085
chr11:66391847-66391848(+) m6A 3'UTR//CDS//exon//intron       24284625//24209618//25456834//24981863//26404942//22575960//22608085
chr11:66391878-66391879(+) m6A 3'UTR//CDS//exon//intron       24284625//24209618//25456834//24981863//26404942//22575960//22608085
chr11:66392133-66392134(+) m6A CDS//intron       24284625//24981863//22575960
chr11:66392419-66392420(+) Y CDS//intron       26075521
chr11:66394615-66394616(+) m6A 3'UTR       24284625//24209618//24981863//22608085
chr11:66394624-66394625(+) m6A 3'UTR       24284625//24209618//24981863//22608085
chr11:66394641-66394642(+) m6A 3'UTR       24284625//24209618//24981863//27773535//22608085
chr11:66394748-66394749(+) m6A 3'UTR       24284625//24209618//24981863//27773535//22608085
chr11:66394776-66394777(+) m6A 3'UTR       24284625

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate RBM14
Chromatin K562 cells     -
Cytoplasm Nasopharyngeal carcinoma cells     20498841
Cytosol K562 cells     -
Exosome Blood     -
Nucleolus K562 cells     -
Nucleoplasm K562 cells     -
Nucleus Nasopharyngeal carcinoma cells     20498841
Nucleus Colon cancer cells     24393600
Nucleus HCC cell line (HepG2)|HeLa-S3 cells|K562 cells     -

Interaction Network (The top 100 interactions):


Interactor1: hbv-miR-B7-5p
Interactor2: RBM14

Evidence Support:


Prediction-Evidence miRanda//Targetscan
Support Database VmiReg

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